作者
Wen Jun Song, Qi Wei Qin, Jin Qiu, Can Hua Huang, Fan Wang, Choy Leong Hew
发表日期
2004/11/15
期刊
Journal of virology
卷号
78
期号
22
页码范围
12576-12590
出版商
American Society for Microbiology
简介
Here we report the complete genome sequence of Singapore grouper iridovirus (SGIV). Sequencing of the random shotgun and restriction endonuclease genomic libraries showed that the entire SGIV genome consists of 140,131 nucleotide bp. One hundred sixty-two open reading frames (ORFs) from the sense and antisense DNA strands, coding for lengths varying from 41 to 1,268 amino acids, were identified. Computer-assisted analyses of the deduced amino acid sequences revealed that 77 of the ORFs exhibited homologies to known virus genes, 23 of which matched functional iridovirus proteins. Forty-two putative conserved domains or signatures were detected in the National Center for Biotechnology Information CD-Search database and PROSITE database. An assortment of enzyme activities involved in DNA replication, transcription, nucleotide metabolism, cell signaling, etc., were identified. Viruses were …
引用总数
20042005200620072008200920102011201220132014201520162017201820192020202120222023202415118125162471412151310694118611