作者
Frederic Romagne, Didac Santesmasses, Louise White, Gaurab K Sarangi, Marco Mariotti, Ron Hübler, Antje Weihmann, Genís Parra, Vadim N Gladyshev, Roderic Guigo, Sergi Castellano
发表日期
2014/1/1
期刊
Nucleic acids research
卷号
42
期号
D1
页码范围
D437-D443
出版商
Oxford University Press
简介
SelenoDB (http://www.selenodb.org) aims to provide high-quality annotations of selenoprotein genes, proteins and SECIS elements. Selenoproteins are proteins that contain the amino acid selenocysteine (Sec) and the first release of the database included annotations for eight species. Since the release of SelenoDB 1.0 many new animal genomes have been sequenced. The annotations of selenoproteins in new genomes usually contain many errors in major databases. For this reason, we have now fully annotated selenoprotein genes in 58 animal genomes. We provide manually curated annotations for human selenoproteins, whereas we use an automatic annotation pipeline to annotate selenoprotein genes in other animal genomes. In addition, we annotate the homologous genes containing cysteine (Cys) instead of Sec. Finally, we have surveyed genetic variation in the annotated genes in humans. We …
引用总数
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