作者
Amanda M Duran, Jens Meiler
发表日期
2018/1
期刊
Protein Science
卷号
27
期号
1
页码范围
341-355
简介
Computational membrane protein design is challenging due to the small number of high‐resolution structures available to elucidate the physical basis of membrane protein structure, multiple functionally important conformational states, and a limited number of high‐throughput biophysical assays to monitor function. However, structural determination of membrane proteins has made tremendous progress in the past years. Concurrently the field of soluble computational design has made impressive inroads. These developments allow us to tackle the formidable challenge of designing functional membrane proteins. Herein, Rosetta is benchmarked for membrane protein design. We evaluate strategies to cope with the often reduced quality of experimental membrane protein structures. Further, we test the usage of symmetry in design protocols, which is particularly important as many membrane proteins exist as homo …
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