作者
Hua Bao, Rui Liu, Haimeng Tang, Xuxiaochen Wu, Xiaoxi Chen, Yong Wu, Xue Wu, Yang Shao
发表日期
2024/6/1
来源
Journal of Clinical Oncology
卷号
42
期号
16_suppl
页码范围
e17501-e17501
出版商
American Society of Clinical Oncology
简介
e17501
Background: In cancer therapy, understanding homologous recombination deficiency (HRD) is paramount, particularly due to its positive association with sensitivity to PARP inhibitor (PARPi) therapy. We propose using a targeted sequencing approach as a cost-effective and efficient alternative to the current standard of whole genome sequencing (WGS). In this study, we determine the sensitivity and clinical applications of a panel of 437 genes and over 12000 heterozygous SNP loci for evaluating HRD. Methods: HRD positivity for this assay was set at an HRD score of ≥38. To determine the limit of detection (LOD), we diluted 19 samples (4 tiers, 20 repeats each) with known HRD status. Accuracy of the assay was determined by comparing HRD status calls of 40 samples with those obtained through whole genome sequencing. Reproducibility of the assay was tested by measuring variance of HRD status for …
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