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Due to the complexity and unique features of the hydroacoustic channel, ship-radiated noise (SRN) detected using a passive sonar tends mostly to distort. SRN feature extraction has been proposed to improve the detected passive sonar signal. Unfortunately, the current methods used in SRN feature extraction have many shortcomings. Considering this, in this paper we propose a new multi-stage feature extraction approach to enhance the current SRN feature extractions based on enhanced variational mode decomposition (EVMD), weighted permutation entropy (WPE), local tangent space alignment (LTSA), and particle swarm optimization-based support vector machine (PSO-SVM). In the proposed method, first, we enhance the decomposition operation of the conventional VMD by decomposing the SRN signal into a finite group of intrinsic mode functions (IMFs) and then calculate the WPE of each IMF. Then, the high-dimensional features obtained are reduced to two-dimensional ones by using the LTSA method. Finally, the feature vectors are fed into the PSO-SVM multi-class classifier to realize the classification of different types of SRN sample. The simulation and experimental results demonstrate that the recognition rate of the proposed method overcomes the conventional SRN feature extraction methods, and it has a recognition rate of up to 96.6667%.