Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence PJ Wittkopp, G Kalay Nature Reviews Genetics 13 (1), 59-69, 2012 | 1174 | 2012 |
Evolutionary changes in cis and trans gene regulation PJ Wittkopp, BK Haerum, AG Clark Nature 430 (6995), 85-88, 2004 | 953 | 2004 |
Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila N Gompel, B Prud'homme, PJ Wittkopp, VA Kassner, SB Carroll Nature 433 (7025), 481-487, 2005 | 761 | 2005 |
Regulatory divergence in Drosophila revealed by mRNA-seq CJ McManus, JD Coolon, MO Duff, J Eipper-Mains, BR Graveley, ... Genome research 20 (6), 816-825, 2010 | 442 | 2010 |
Regulatory changes underlying expression differences within and between Drosophila species PJ Wittkopp, BK Haerum, AG Clark Nature genetics 40 (3), 346-350, 2008 | 421 | 2008 |
Reciprocal functions of the Drosophila Yellow and Ebony proteins in the development and evolution of pigment patterns PJ Wittkopp, JR True, SB Carroll Oxford University Press for The Company of Biologists Limited 129 (8), 1849-1858, 2002 | 367 | 2002 |
Development and evolution of insect pigmentation: genetic mechanisms and the potential consequences of pleiotropy PJ Wittkopp, P Beldade Seminars in cell & developmental biology 20 (1), 65-71, 2009 | 351 | 2009 |
Evolution in black and white: genetic control of pigment patterns in Drosophila PJ Wittkopp, SB Carroll, A Kopp TRENDS in Genetics 19 (9), 495-504, 2003 | 338 | 2003 |
Evolution of yellow Gene Regulation and Pigmentation in Drosophila PJ Wittkopp, K Vaccaro, SB Carroll Current Biology 12 (18), 1547-1556, 2002 | 280 | 2002 |
Compensatory cis-trans Evolution and the Dysregulation of Gene Expression in Interspecific Hybrids of Drosophila CR Landry, PJ Wittkopp, CH Taubes, JM Ranz, AG Clark, DL Hartl Genetics 171 (4), 1813-1822, 2005 | 261 | 2005 |
The Vestigial and Scalloped proteins act together to directly regulate wing-specific gene expression in Drosophila G Halder, P Polaczyk, ME Kraus, A Hudson, J Kim, A Laughon, S Carroll Genes & development 12 (24), 3900-3909, 1998 | 259 | 1998 |
Drosophila pigmentation evolution: Divergent genotypes underlying convergent phenotypes PJ Wittkopp, BL Williams, JE Selegue, SB Carroll Proceedings of the National Academy of Sciences 100 (4), 1808-1813, 2003 | 238 | 2003 |
Evaluating the role of natural selection in the evolution of gene regulation JC Fay, PJ Wittkopp Heredity 100 (2), 191-199, 2008 | 187 | 2008 |
Tempo and mode of regulatory evolution in Drosophila JD Coolon, CJ McManus, KR Stevenson, BR Graveley, PJ Wittkopp Genome research 24 (5), 797-808, 2014 | 177 | 2014 |
Intraspecific polymorphism to interspecific divergence: genetics of pigmentation in Drosophila PJ Wittkopp, EE Stewart, LL Arnold, AH Neidert, BK Haerum, ... Science 326 (5952), 540-544, 2009 | 171 | 2009 |
Molecular and evolutionary processes generating variation in gene expression MS Hill, P Vande Zande, PJ Wittkopp Nature Reviews Genetics 22 (4), 203-215, 2021 | 167 | 2021 |
Sources of bias in measures of allele-specific expression derived from RNA-seq data aligned to a single reference genome KR Stevenson, JD Coolon, PJ Wittkopp BMC genomics 14, 1-13, 2013 | 164 | 2013 |
Selection on noise constrains variation in a eukaryotic promoter BPH Metzger, DC Yuan, JD Gruber, F Duveau, PJ Wittkopp Nature 521 (7552), 344-347, 2015 | 161 | 2015 |
The significance and scope of evolutionary developmental biology: a vision for the 21st century AP Moczek, KE Sears, A Stollewerk, PJ Wittkopp, P Diggle, I Dworkin, ... Evolution & development 17 (3), 198-219, 2015 | 118 | 2015 |
A gene necessary for normal male courtship, yellow, acts downstream of fruitless in the Drosophila melanogaster larval brain MD Drapeau, A Radovic, PJ Wittkopp, AD Long Journal of Neurobiology 55 (1), 53-72, 2003 | 114 | 2003 |