| Comprehensive benchmarking and ensemble approaches for metagenomic classifiers ABR McIntyre, R Ounit, E Afshinnekoo, RJ Prill, E Hénaff, N Alexander, ... Genome biology 18, 1-19, 2017 | 315 | 2017 |
| Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection V Ramlall, PM Thangaraj, C Meydan, J Foox, D Butler, J Kim, B May, ... Nature medicine 26 (10), 1609-1615, 2020 | 300 | 2020 |
| Fundamental biological features of spaceflight: advancing the field to enable deep-space exploration E Afshinnekoo, RT Scott, MJ MacKay, E Pariset, E Cekanaviciute, ... Cell 183 (5), 1162-1184, 2020 | 287 | 2020 |
| The spatial landscape of lung pathology during COVID-19 progression AF Rendeiro, H Ravichandran, Y Bram, V Chandar, J Kim, C Meydan, ... Nature 593 (7860), 564-569, 2021 | 284 | 2021 |
| Comprehensive multi-omics analysis reveals mitochondrial stress as a central biological hub for spaceflight impact WA da Silveira, H Fazelinia, SB Rosenthal, EC Laiakis, MS Kim, ... Cell 183 (5), 1185-1201. e20, 2020 | 221 | 2020 |
| Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions D Butler, C Mozsary, C Meydan, J Foox, J Rosiene, A Shaiber, D Danko, ... Nature communications 12 (1), 1660, 2021 | 145 | 2021 |
| Investigation of product-derived lymphoma following infusion of piggyBac-modified CD19 chimeric antigen receptor T cells KP Micklethwaite, K Gowrishankar, BS Gloss, Z Li, JA Street, L Moezzi, ... Blood, The Journal of the American Society of Hematology 138 (16), 1391-1405, 2021 | 129 | 2021 |
| DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation Y Liu, W Rosikiewicz, Z Pan, N Jillette, P Wang, A Taghbalout, J Foox, ... Genome biology 22, 1-33, 2021 | 125 | 2021 |
| Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius JA Rosenfeld, D Reeves, MR Brugler, A Narechania, S Simon, R Durrett, ... Nature communications 7 (1), 10164, 2016 | 92 | 2016 |
| Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study J Foox, SW Tighe, CM Nicolet, JM Zook, M Byrska-Bishop, WE Clarke, ... Nature biotechnology 39 (9), 1129-1140, 2021 | 87 | 2021 |
| Shotgun transcriptome and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions DJ Butler, C Mozsary, C Meydan, D Danko, J Foox, J Rosiene, A Shaiber, ... BioRxiv, 2020 | 84 | 2020 |
| A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood DL Ng, AC Granados, YA Santos, V Servellita, GM Goldgof, C Meydan, ... Science advances 7 (6), eabe5984, 2021 | 82 | 2021 |
| Role of miR-2392 in driving SARS-CoV-2 infection JT McDonald, FJ Enguita, D Taylor, RJ Griffin, W Priebe, MR Emmett, ... Cell reports 37 (3), 2021 | 66 | 2021 |
| Relationships between SARS-CoV-2 in wastewater and COVID-19 clinical cases and hospitalizations, with and without normalization against indicators of human waste Q Zhan, KM Babler, ME Sharkey, A Amirali, CC Beaver, MM Boone, ... Acs Es&T Water 2 (11), 1992-2003, 2022 | 64 | 2022 |
| Genomic methods and microbiological technologies for profiling novel and extreme environments for the extreme microbiome project (XMP) S Tighe, E Afshinnekoo, TM Rock, K McGrath, N Alexander, A McIntyre, ... Journal of biomolecular techniques: JBT 28 (1), 31, 2017 | 63 | 2017 |
| Temporal telomere and DNA damage responses in the space radiation environment JJ Luxton, MJ McKenna, LE Taylor, KA George, SR Zwart, BE Crucian, ... Cell Reports 33 (10), 2020 | 58 | 2020 |
| The Road to Cnidaria: History of Phylogeny of the Myxozoa J Foox, ME Siddall Journal of Parasitology, 2015 | 58 | 2015 |
| Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts JW Guarnieri, JM Dybas, H Fazelinia, MS Kim, J Frere, Y Zhang, ... Science translational medicine 15 (708), eabq1533, 2023 | 56 | 2023 |
| Clonal hematopoiesis before, during, and after human spaceflight N Mencia-Trinchant, MJ MacKay, C Chin, E Afshinnekoo, J Foox, ... Cell reports 33 (10), 2020 | 44 | 2020 |
| Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing LT Fang, B Zhu, Y Zhao, W Chen, Z Yang, L Kerrigan, K Langenbach, ... Nature biotechnology 39 (9), 1151-1160, 2021 | 42 | 2021 |
