Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes D Racko, F Benedetti, J Dorier, A Stasiak Nucleic acids research 46 (4), 1648-1660, 2018 | 112 | 2018 |
Preparation and characterization of a new derivative of rhodamine B with an alkoxysilane moiety T Nedelčev, D Račko, I Krupa Dyes and Pigments 76 (2), 550-556, 2008 | 58 | 2008 |
Are TADs supercoiled? D Racko, F Benedetti, J Dorier, A Stasiak Nucleic acids research 47 (2), 521-532, 2019 | 56 | 2019 |
Mechanical properties of silica hydrogels prepared and aged at physiological conditions: testing in the compression mode I Krupa, T Nedelčev, D Račko, I Lacík Journal of sol-gel science and technology 53, 107-114, 2010 | 46 | 2010 |
Chromatin loop extrusion and chromatin unknotting D Racko, F Benedetti, D Goundaroulis, A Stasiak Polymers 10 (10), 1126, 2018 | 45 | 2018 |
Nanocomposite photoactuators based on an ethylene vinyl acetate copolymer filled with carbon nanotubes K Czaniková, N Torras, J Esteve, I Krupa, P Kasák, E Pavlova, D Račko, ... Sensors and Actuators B: Chemical 186, 701-710, 2013 | 41 | 2013 |
How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation EJ Rawdon, J Dorier, D Racko, KC Millett, A Stasiak Nucleic acids research 44 (10), 4528-4538, 2016 | 36 | 2016 |
Transcription-induced supercoiling explains formation of self-interacting chromatin domains in S. pombe F Benedetti, D Racko, J Dorier, Y Burnier, A Stasiak Nucleic acids research 45 (17), 9850-9859, 2017 | 35 | 2017 |
Effects of physiological self-crowding of DNA on shape and biological properties of DNA molecules with various levels of supercoiling F Benedetti, A Japaridze, J Dorier, D Racko, R Kwapich, Y Burnier, ... Nucleic acids research 43 (4), 2390-2399, 2015 | 35 | 2015 |
Generation of supercoils in nicked and gapped DNA drives DNA unknotting and postreplicative decatenation D Racko, F Benedetti, J Dorier, Y Burnier, A Stasiak Nucleic acids research 43 (15), 7229-7236, 2015 | 33 | 2015 |
Positron annihilation lifetime response and relaxation dynamics in glycerol J Bartoš, O Šauša, D Račko, J Krištiak, JJ Fontanella Journal of Non-Crystalline Solids 351 (33-36), 2599-2604, 2005 | 32 | 2005 |
Segregation of semiflexible macromolecules in nanochannel D Račko, P Cifra The Journal of Chemical Physics 138 (18), 2013 | 31 | 2013 |
The free-volume structure of a polymer melt, poly (vinyl methylether) from molecular dynamics simulations and cavity analysis D Račko, S Capponi, F Alvarez, J Colmenero, J Bartoš The Journal of chemical physics 131 (6), 2009 | 26 | 2009 |
Insights into positron annihilation lifetime spectroscopy by molecular dynamics simulations: Free-volume calculations for liquid and glassy glycerol D Račko, R Chelli, G Cardini, J Bartoš, S Califano The European Physical Journal D-Atomic, Molecular, Optical and Plasma …, 2005 | 17 | 2005 |
Free volume in a PVME polymer–water solution S Capponi, F Alvarez, D Račko Macromolecules 53 (12), 4770-4782, 2020 | 16 | 2020 |
Glucose diffusivity and porosity in silica hydrogel based on organofunctional silanes I Krupa, T Nedelčev, D Chorvát Jr, D Račko, I Lacík European polymer journal 47 (7), 1477-1484, 2011 | 16 | 2011 |
Fluorescence study of the dynamics of a star-shaped poly (ɛ-caprolactone) s in THF: A comparison with a star-shaped poly (l-lactide) s M Danko, J Libiszowski, M Wolszczak, D Racko, A Duda Polymer 50 (10), 2209-2219, 2009 | 16 | 2009 |
The free volume of poly (vinyl methylether) as computed in a wide temperature range and at length scales up to the nanoregion D Račko, S Capponi, F Alvarez, J Colmenero The Journal of Chemical Physics 134 (4), 2011 | 15 | 2011 |
Free volume in poly (propylene glycol) and its relationships to spin probe reorientation J Bartoš, L Andreozzi, M Faetti, O Šauša, D Račko, J Krištiak Journal of non-crystalline solids 352 (42-49), 4785-4789, 2006 | 14 | 2006 |
Free volume from molecular dynamics simulations and its relationships to the positron annihilation lifetime spectroscopy D Račko, R Chelli, G Cardini, S Califano, J Bartoš Theoretical Chemistry Accounts 118 (2), 443-448, 2007 | 11 | 2007 |