| Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing H Ai, X Fang, B Yang, Z Huang, H Chen, L Mao, F Zhang, L Zhang, L Cui, ... Nature genetics 47 (3), 217-225, 2015 | 385 | 2015 |
| Possible introgression of the VRTN mutation increasing vertebral number, carcass length and teat number from Chinese pigs into European pigs J Yang, L Huang, M Yang, Y Fan, L Li, S Fang, W Deng, L Cui, Z Zhang, ... Scientific reports 6 (1), 19240, 2016 | 85 | 2016 |
| Reproducibility of methods to detect differentially expressed genes from single-cell RNA sequencing T Mou, W Deng, F Gu, Y Pawitan, TN Vu Frontiers in genetics 10, 1331, 2020 | 73 | 2020 |
| Population structure and genome characterization of local pig breeds in Russia, Belorussia, Kazakhstan and Ukraine A Traspov*, W Deng*, O Kostyunina, J Ji, K Shatokhin, S Lugovoy, ... Genetics Selection Evolution 48 (1), 1-9, 2016 | 70 | 2016 |
| A fast detection of fusion genes from paired-end RNA-seq data TN Vu, W Deng, QT Trac, S Calza, W Hwang, Y Pawitan BMC genomics 19, 1-13, 2018 | 40 | 2018 |
| Accumulation of potential driver genes with genomic alterations predicts survival of high-risk neuroblastoma patients C Suo*, W Deng*, TN Vu, M Li, L Shi, Y Pawitan Biology direct 13 (1), 1-11, 2018 | 33 | 2018 |
| Genome‐wide association studies identify susceptibility loci affecting respiratory disease in Chinese Erhualian pigs under natural conditions X Huang, T Huang, W Deng, G Yan, H Qiu, Y Huang, S Ke, Y Hou, ... Animal genetics 48 (1), 30-37, 2017 | 22 | 2017 |
| Alternating EM algorithm for a bilinear model in isoform quantification from RNA-seq data W Deng, T Mou, KR Kalari, N Niu, L Wang, Y Pawitan, TN Vu Bioinformatics 36 (3), 805-812, 2020 | 17 | 2020 |
| A nasal cell atlas reveals heterogeneity of tuft cells and their role in directing olfactory stem cell proliferation S Ualiyeva, E Lemire, C Wong, A Perniss, AA Boyd, EC Avilés, ... Science immunology 9 (92), eabq4341, 2024 | 13 | 2024 |
| Genome-wide association and evolutionary analyses reveal the formation of swine facial wrinkles in Chinese Erhualian pigs T Huang, M Zhang, G Yan, X Huang, H Chen, L Zhou, W Deng, Z Zhang, ... Aging (Albany NY) 11 (13), 4672, 2019 | 13 | 2019 |
| The transcriptome‐wide landscape of molecular subtype‐specific mRNA expression profiles in acute myeloid leukemia T Mou, Y Pawitan, M Stahl, M Vesterlund, W Deng, R Jafari, A Bohlin, ... American journal of hematology 96 (5), 580-588, 2021 | 11 | 2021 |
| Single extracellular vesicle surface protein‐based blood assay identifies potential biomarkers for detection and screening of five cancers Y Min*, W Deng*, H Yuan, D Zhu, R Zhao, P Zhang, J Xue, Z Yuan, ... Molecular Oncology, 2024 | 10 | 2024 |
| Fusion gene detection using whole-exome sequencing data in cancer patients W Deng, S Murugan, J Lindberg, V Chellappa, X Shen, Y Pawitan, TN Vu Frontiers in Genetics 13, 820493, 2022 | 8 | 2022 |
| Quantification of mutant–allele expression at isoform level in cancer from RNA-seq data W Deng, T Mou, Y Pawitan, TN Vu NAR Genomics and Bioinformatics 4 (3), lqac052, 2022 | 4 | 2022 |
| Region Plot: an r package for regional plot association results for pigs. F Zhang, ZY Zhang, YN He, H Chen, B Yang, WJ Deng, LS Huang Animal Genetics 46 (1), 2015 | 1 | 2015 |
| 外泌体蛋白质在消化系统恶性肿瘤中的诊断价值 闵雨欣， 袁黄波， 邓文江， 蔡延玲， 徐珂琳， 蒋艳峰， 张铁军， 陈兴栋， 索晨 肿瘤 Tumor 43 (08), 672-683, 2023 | | 2023 |
| Role of exosomal proteins in detecting cancers of digestive system Y Min, H Yuan, W Deng, Y Cai, XU Kelin, Y Jiang, T Zhang, X Chen, ... Tumor 43 (8), 672-683, 2023 | | 2023 |
| Improved statistical methodology for high-throughput omics data analysis W Deng PQDT-Global, 2021 | | 2021 |
