Evidence for an ancient adaptive episode of convergent molecular evolution TA Castoe, APJ de Koning, HM Kim, W Gu, BP Noonan, G Naylor, ... Proceedings of the National Academy of Sciences 106 (22), 8986-8991, 2009 | 336 | 2009 |
Pre-mRNA splicing is facilitated by an optimal RNA polymerase II elongation rate N Fong, H Kim, Y Zhou, X Ji, J Qiu, T Saldi, K Diener, K Jones, XD Fu, ... Genes & development 28 (23), 2663-2676, 2014 | 320 | 2014 |
Gene-specific RNA polymerase II phosphorylation and the CTD code H Kim, B Erickson, W Luo, D Seward, JH Graber, DD Pollock, PC Megee, ... Nature structural & molecular biology 17 (10), 1279-1286, 2010 | 290 | 2010 |
Pre-mRNA splicing is a determinant of histone H3K36 methylation S Kim, H Kim, N Fong, B Erickson, DL Bentley Proceedings of the National Academy of Sciences 108 (33), 13564-13569, 2011 | 248 | 2011 |
AMPK/FIS1-mediated mitophagy is required for self-renewal of human AML stem cells S Pei, M Minhajuddin, B Adane, N Khan, BM Stevens, SC Mack, S Lai, ... Cell stem cell 23 (1), 86-100. e6, 2018 | 230 | 2018 |
Effects of transcription elongation rate and Xrn2 exonuclease activity on RNA polymerase II termination suggest widespread kinetic competition N Fong, K Brannan, B Erickson, H Kim, MA Cortazar, RM Sheridan, ... Molecular cell 60 (2), 256-267, 2015 | 229 | 2015 |
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription K Brannan, H Kim, B Erickson, K Glover-Cutter, S Kim, N Fong, L Kiemele, ... Molecular cell 46 (3), 311-324, 2012 | 226 | 2012 |
Resistance to radiotherapy and PD-L1 blockade is mediated by TIM-3 upregulation and regulatory T-cell infiltration A Oweida, MK Hararah, A Phan, D Binder, S Bhatia, S Lennon, ... Clinical Cancer Research 24 (21), 5368-5380, 2018 | 223 | 2018 |
Human TFIIH kinase CDK7 regulates transcription-associated chromatin modifications CC Ebmeier, B Erickson, BL Allen, MA Allen, H Kim, N Fong, JR Jacobsen, ... Cell reports 20 (5), 1173-1186, 2017 | 133 | 2017 |
Intrinsic amino acid side‐chain hydrophilicity/hydrophobicity coefficients determined by reversed‐phase high‐performance liquid chromatography of model peptides: Comparison … CT Mant, JM Kovacs, HM Kim, DD Pollock, RS Hodges Peptide Science: Original Research on Biomolecules 92 (6), 573-595, 2009 | 123 | 2009 |
The export factor Yra1 modulates mRNA 3′ end processing SA Johnson, H Kim, B Erickson, DL Bentley Nature structural & molecular biology 18 (10), 1164-1171, 2011 | 105 | 2011 |
Activation of Wnt signaling promotes olaparib resistant ovarian cancer TM Yamamoto, A McMellen, ZL Watson, J Aguilera, R Ferguson, ... Molecular carcinogenesis 58 (10), 1770-1782, 2019 | 84 | 2019 |
Histone methyltransferases EHMT1 and EHMT2 (GLP/G9A) maintain PARP inhibitor resistance in high-grade serous ovarian carcinoma ZL Watson, TM Yamamoto, A McMellen, H Kim, CJ Hughes, LJ Wheeler, ... Clinical epigenetics 11, 1-16, 2019 | 69 | 2019 |
PU. 1 enforces quiescence and limits hematopoietic stem cell expansion during inflammatory stress JS Chavez, JL Rabe, D Loeffler, KC Higa, G Hernandez, TS Mills, ... Journal of Experimental Medicine 218 (6), e20201169, 2021 | 63 | 2021 |
Coordination of RNA polymerase II pausing and 3′ end processing factor recruitment with alternative polyadenylation B Fusby, S Kim, B Erickson, H Kim, ML Peterson, DL Bentley Molecular and cellular biology 36 (2), 295-303, 2016 | 54 | 2016 |
Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies HL Johnson, KB Cohen, WA Baumgartner Jr, Z Lu, M Bada, T Kester, ... Biocomputing 2006, 28-39, 2006 | 54 | 2006 |
Gene promoters dictate histone occupancy within genes R Perales, B Erickson, L Zhang, H Kim, E Valiquett, D Bentley The EMBO journal 32 (19), 2645-2656, 2013 | 42 | 2013 |
A survey of statistical software for analysing RNA-seq data D Gao, J Kim, H Kim, TL Phang, H Selby, AC Tan, T Tong Human genomics 5, 1-5, 2010 | 39 | 2010 |
BiNGS! SL-seq: a bioinformatics pipeline for the analysis and interpretation of deep sequencing genome-wide synthetic lethal screen J Kim, AC Tan Next Generation Microarray Bioinformatics: Methods and Protocols, 389-398, 2012 | 36 | 2012 |
A short survey of computational analysis methods in analysing ChIP-seq data H Kim, J Kim, H Selby, D Gao, T Tong, T Lip Phang, A Choon Tan Human genomics 5, 1-7, 2011 | 36 | 2011 |