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Chang Ye
Chang Ye
在 uchicago.edu 的电子邮件经过验证
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年份
Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution
Q Dai, LS Zhang, HL Sun, K Pajdzik, L Yang, C Ye, CW Ju, S Liu, Y Wang, ...
Nature biotechnology 41 (3), 344-354, 2023
1042023
Metabolomic analyses reveal new stage-specific features of COVID-19
H Jia, C Liu, D Li, Q Huang, D Liu, Y Zhang, C Ye, D Zhou, Y Wang, Y Tan, ...
European Respiratory Journal 59 (2), 2022
802022
Mapping single-cell-resolution cell phylogeny reveals cell population dynamics during organ development
K Liu, S Deng, C Ye, Z Yao, J Wang, H Gong, L Liu, X He
Nature Methods 18 (12), 1506-1514, 2021
262021
m7G-quant-seq: Quantitative Detection of RNA Internal N7-Methylguanosine
LS Zhang, CW Ju, C Liu, J Wei, Q Dai, L Chen, C Ye, C He
ACS Chemical Biology 17 (12), 3306-3312, 2022
232022
m6A-SAC-seq for quantitative whole transcriptome m6A profiling
R Ge, C Ye, Y Peng, Q Dai, Y Zhao, S Liu, P Wang, L Hu, C He
Nature protocols 18 (2), 626-657, 2023
212023
RBFOX2 recognizes N6-methyladenosine to suppress transcription and block myeloid leukaemia differentiation
X Dou, Y Xiao, C Shen, K Wang, T Wu, C Liu, Y Li, X Yu, J Liu, Q Dai, ...
Nature cell biology 25 (9), 1359-1368, 2023
192023
Light-induced LLPS of the CRY2/SPA1/FIO1 complex regulating mRNA methylation and chlorophyll homeostasis in Arabidopsis
B Jiang, Z Zhong, L Gu, X Zhang, J Wei, C Ye, G Lin, G Qu, X Xiang, ...
Nature Plants 9 (12), 2042-2058, 2023
132023
YTHDF2/m6A/NF‐κB axis controls anti‐tumor immunity by regulating intratumoral Tregs
L Zhang, X Dou, Z Zheng, C Ye, TX Lu, HL Liang, L Wang, ...
The EMBO Journal 42 (15), e113126, 2023
132023
Ultrafast bisulfite sequencing detection of 5-methylcytosine in DNA and RNA
Q Dai, C Ye, I Irkliyenko, Y Wang, HL Sun, Y Gao, Y Liu, A Beadell, ...
Nature Biotechnology, 1-12, 2024
122024
Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2′-O-methylation
L Chen, LS Zhang, C Ye, H Zhou, B Liu, B Gao, Z Deng, C Zhao, C He, ...
Cell Research 33 (9), 727-730, 2023
102023
Defining endogenous barcoding sites for CRISPR/Cas9-based cell lineage tracing in zebrafish
C Ye, Z Chen, Z Liu, F Wang, X He
Journal of genetics and genomics 47 (2), 85-91, 2020
102020
Chemical Proteomic Discovery of Isotype‐Selective Covalent Inhibitors of the RNA Methyltransferase NSUN2
Y Tao, JG Felber, Z Zou, E Njomen, JR Remsberg, D Ogasawara, C Ye, ...
Angewandte Chemie International Edition 62 (51), e202311924, 2023
92023
Assessing the influence of dietary history on gut microbiota
B Yang, C Ye, B Yan, X He, K Xing
Current microbiology 76, 237-247, 2019
92019
BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution
LS Zhang, C Ye, CW Ju, B Gao, X Feng, HL Sun, J Wei, F Yang, Q Dai, ...
Nature Protocols 19 (2), 517-538, 2024
62024
Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome
X Feng, X Cui, LS Zhang, C Ye, P Wang, Y Zhong, T Wu, Z Zheng, C He
Molecular cell 84 (3), 596-610. e6, 2024
42024
Profiling of RNA-binding protein binding sites by in situ reverse transcription-based sequencing
Y Xiao, YM Chen, Z Zou, C Ye, X Dou, J Wu, C Liu, S Liu, H Yan, P Wang, ...
Nature Methods 21 (2), 247-258, 2024
32024
Quantitative profiling of m6A at single base resolution across the life cycle of rice and Arabidopsis
G Wang, H Li, C Ye, K He, S Liu, B Jiang, R Ge, B Gao, J Wei, Y Zhao, ...
Nature Communications 15 (1), 4881, 2024
12024
Small-molecule inhibition of the METTL3/METTL14 complex suppresses neuroblastoma tumor growth and promotes differentiation
M Pomaville, M Chennakesavalu, P Wang, Z Jiang, HL Sun, P Ren, ...
Cell reports 43 (5), 2024
12024
Chemical manipulation of m1A mediates its detection in human tRNA
K Pajdzik, R Lyu, X Dou, C Ye, LS Zhang, Q Dai, C He
RNA 30 (5), 548-559, 2024
12024
Analysis of genome-wide 5-hydroxymethylation of blood samples stored in different anticoagulants: opportunities for the expansion of clinical resources for epigenetic research
L Gao, Z Zhang, XL Cui, D West-Szymanski, C Ye, C He, W Zhang, ...
Epigenetics 18 (1), 2271692, 2023
12023
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