Differences in fecal microbiomes and metabolomes of people with vs without irritable bowel syndrome and bile acid malabsorption IB Jeffery, A Das, E O’Herlihy, S Coughlan, K Cisek, M Moore, F Bradley, ... Gastroenterology 158 (4), 1016-1028. e8, 2020 | 167 | 2020 |
The gut virome in Irritable Bowel Syndrome differs from that of controls S Coughlan, A Das, E O’Herlihy, F Shanahan, PW O’Toole, IB Jeffery Gut Microbes 13 (1), 1-15, 2021 | 51 | 2021 |
Pro-inflammatory flagellin proteins of prevalent motile commensal bacteria are variably abundant in the intestinal microbiome of elderly humans BA Neville, PO Sheridan, HMB Harris, S Coughlan, HJ Flint, SH Duncan, ... PLoS One 8 (7), e68919, 2013 | 48 | 2013 |
The genome of Leishmania adleri from a mammalian host highlights chromosome fission in Sauroleishmania S Coughlan, P Mulhair, M Sanders, G Schonian, JA Cotton, T Downing Scientific reports 7 (1), 1-13, 2017 | 41 | 2017 |
Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene evolution in the Viannia subgenus S Coughlan, AS Taylor, E Feane, M Sanders, G Schonian, JA Cotton, ... Royal Society Open Science, 2018 | 38 | 2018 |
Redeploying β-lactam antibiotics as a novel antivirulence strategy for the treatment of methicillin-resistant Staphylococcus aureus infections EM Waters, JK Rudkin, S Coughlan, GC Clair, JN Adkins, S Gore, G Xia, ... The Journal of infectious diseases 215 (1), 80-87, 2017 | 33 | 2017 |
Developing educational resources for population genetics in R: An open and collaborative approach ZN Kamvar, MM López‐Uribe, S Coughlan, NJ Grünwald, H Lapp, ... Molecular ecology resources 17 (1), 120-128, 2017 | 32 | 2017 |
Tandem Amplification of the Staphylococcal Cassette Chromosome mec Element Can Drive High-Level Methicillin Resistance in Methicillin-Resistant Staphylococcus aureus LA Gallagher, S Coughlan, NS Black, P Lalor, EM Waters, B Wee, ... Antimicrobial agents and chemotherapy 61 (9), e00869-17, 2017 | 24 | 2017 |
Whole-genome sequencing of SARS-CoV-2 in the Republic of Ireland during waves 1 and 2 of the pandemic PWG Mallon, F Crispie, G Gonzalez, W Tinago, AA Garcia Leon, ... MedRxiv, 2021.02. 09.21251402, 2021 | 15 | 2021 |
Volatile Compounds From Bacillus, Serratia, and Pseudomonas Promote Growth and Alter the Transcriptional Landscape of Solanum tuberosum in a Passively Ventilated Growth System D Heenan-Daly, S Coughlan, E Dillane, BD Prestwich Frontiers in Microbiology 12, 2021 | 13 | 2021 |
GNOSIS: an R Shiny app supporting cancer genomics survival analysis with cBioPortal L King, A Flaus, S Coughlan, E Holian, A Golden HRB Open Research 5, 2022 | 4 | 2022 |
Genome-wide Variant Discovery using Sequence Assembly, Mapping and Population-Wide Analysis S Coughlan, S Barreira, C Seoighe, T Downing Bioinformatics and Data Analysis in Microbiology, 51, 2014 | 4 | 2014 |
The African Society of Human Genetics successfully launches global data science workshops V Nembaware, D Bennett, ER Chimusa, T Chikowore, R Daodu, ... Trends in Genetics, 2023 | 1 | 2023 |
CDC7 Inhibition Drives an Inflammatory Response and a p53-Dependent Senescent-Like State in Breast Epithelial Cells C Cazzaniga, A Göder, A Quinlan, MD Rainey, S Coughlan, S Bernard, ... Available at SSRN 4514474, 0 | 1* | |