Comprehensive functional genomic resource and integrative model for the human brain D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, ... Science 362 (6420), eaat8464, 2018 | 853 | 2018 |
CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder GE Hoffman, J Bendl, G Voloudakis, KS Montgomery, L Sloofman, ... Scientific data 6 (1), 180, 2019 | 190 | 2019 |
Gene expression imputation across multiple brain regions provides insights into schizophrenia risk LM Huckins, A Dobbyn, DM Ruderfer, G Hoffman, W Wang, AF Pardinas, ... Nature genetics 51 (4), 659-674, 2019 | 182 | 2019 |
Protein stability and folding kinetics in the nucleus and endoplasmic reticulum of eucaryotic cells A Dhar, K Girdhar, D Singh, H Gelman, S Ebbinghaus, M Gruebele Biophysical journal 101 (2), 421-430, 2011 | 159 | 2011 |
Landscape of conditional eQTL in dorsolateral prefrontal cortex and co-localization with schizophrenia GWAS A Dobbyn, LM Huckins, J Boocock, LG Sloofman, BS Glicksberg, ... The American Journal of Human Genetics 102 (6), 1169-1184, 2018 | 140 | 2018 |
Cell-specific histone modification maps in the human frontal lobe link schizophrenia risk to the neuronal epigenome K Girdhar, GE Hoffman, Y Jiang, L Brown, M Kundakovic, ME Hauberg, ... Nature neuroscience 21 (8), 1126-1136, 2018 | 123 | 2018 |
Multiscale causal networks identify VGF as a key regulator of Alzheimer’s disease ND Beckmann, WJ Lin, M Wang, AT Cohain, AW Charney, P Wang, W Ma, ... Nature communications 11 (1), 3942, 2020 | 116 | 2020 |
Genetics of the human microglia regulome refines Alzheimer’s disease risk loci R Kosoy, JF Fullard, B Zeng, J Bendl, P Dong, S Rahman, SP Kleopoulos, ... Nature genetics 54 (8), 1145-1154, 2022 | 78 | 2022 |
Analysis of genetically regulated gene expression identifies a prefrontal PTSD gene, SNRNP35, specific to military cohorts LM Huckins, C Chatzinakos, MS Breen, J Hartmann, T Klengel, ... Cell reports 31 (9), 2020 | 59 | 2020 |
The behavioral space of zebrafish locomotion and its neural network analog K Girdhar, M Gruebele, YR Chemla PloS one 10 (7), e0128668, 2015 | 51 | 2015 |
Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification GE Hoffman, J Bendl, K Girdhar, EE Schadt, P Roussos Nucleic acids research 47 (20), 10597-10611, 2019 | 44 | 2019 |
The three-dimensional landscape of cortical chromatin accessibility in Alzheimer’s disease J Bendl, ME Hauberg, K Girdhar, E Im, JM Vicari, S Rahman, ... Nature neuroscience 25 (10), 1366-1378, 2022 | 38 | 2022 |
Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains K Girdhar, GE Hoffman, J Bendl, S Rahman, P Dong, W Liao, ... Nature neuroscience 25 (4), 474-483, 2022 | 36 | 2022 |
Better biomolecule thermodynamics from kinetics K Girdhar, G Scott, YR Chemla, M Gruebele The Journal of chemical physics 135 (1), 2011 | 32 | 2011 |
Population-level variation in enhancer expression identifies disease mechanisms in the human brain P Dong, GE Hoffman, P Apontes, J Bendl, S Rahman, MB Fernando, ... Nature genetics 54 (10), 1493-1503, 2022 | 28 | 2022 |
Neuroimmune mechanisms of opioid use disorder and recovery: Translatability to human studies, and future research directions ER Butelman, RZ Goldstein, CA Nwaneshiudu, K Girdhar, P Roussos, ... Neuroscience, 2023 | 12 | 2023 |
decorate: differential epigenetic correlation test GE Hoffman, J Bendl, K Girdhar, P Roussos Bioinformatics 36 (9), 2856-2861, 2020 | 8 | 2020 |
The neuroepigenome: implications of chemical and physical modifications of genomic DNA in schizophrenia K Girdhar, S Rahman, P Dong, JF Fullard, P Roussos Biological Psychiatry 92 (6), 443-449, 2022 | 7 | 2022 |
Convergent impact of schizophrenia risk genes KG Townsley, A Li, PJM Deans, JF Fullard, A Yu, S Cartwright, W Zhang, ... bioRxiv, 2022.03. 29.486286, 2022 | 7 | 2022 |
Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome S Rahman, P Dong, P Apontes, MB Fernando, R Kosoy, KG Townsley, ... Nucleic acids research 51 (20), 11142-11161, 2023 | 5 | 2023 |