| Tumor cell-intrinsic factors underlie heterogeneity of immune cell infiltration and response to immunotherapy J Li, KT Byrne, F Yan, T Yamazoe, Z Chen, T Baslan, LP Richman, JH Lin, ... Immunity 49 (1), 178-193. e7, 2018 | 606 | 2018 |
| Identification of early replicating fragile sites that contribute to genome instability JH Barlow, RB Faryabi, E Callén, N Wong, A Malhowski, HT Chen, ... Cell 152 (3), 620-632, 2013 | 474 | 2013 |
| 53BP1 mediates productive and mutagenic DNA repair through distinct phosphoprotein interactions E Callen, M Di Virgilio, MJ Kruhlak, M Nieto-Soler, N Wong, HT Chen, ... Cell 153 (6), 1266-1280, 2013 | 372 | 2013 |
| BRCA1 functions independently of homologous recombination in DNA interstrand crosslink repair SF Bunting, E Callén, ML Kozak, JM Kim, N Wong, AJ López-Contreras, ... Molecular cell 46 (2), 125-135, 2012 | 293 | 2012 |
| DNA-damage-induced differentiation of leukaemic cells as an anti-cancer barrier MA Santos, RB Faryabi, AV Ergen, AM Day, A Malhowski, A Canela, ... Nature 514 (7520), 107-111, 2014 | 211 | 2014 |
| CtIP-mediated resection is essential for viability and can operate independently of BRCA1 F Polato, E Callen, N Wong, R Faryabi, S Bunting, HT Chen, M Kozak, ... The Journal of experimental medicine 211 (6), 1027, 2014 | 140 | 2014 |
| ALC1 links chromatin accessibility to PARP inhibitor response in homologous recombination-deficient cells P Verma, Y Zhou, Z Cao, PV Deraska, M Deb, E Arai, W Li, Y Shao, ... Nature cell biology 23 (2), 160-171, 2021 | 108 | 2021 |
| Oncogenic notch promotes long-range regulatory interactions within hyperconnected 3D cliques J Petrovic, Y Zhou, M Fasolino, N Goldman, GW Schwartz, MR Mumbach, ... Molecular cell 73 (6), 1174-1190. e12, 2019 | 92 | 2019 |
| On approximate stochastic control in genetic regulatory networks B Faryabi, A Datta, ER Dougherty IET Systems Biology 1 (6), 361-368, 2007 | 87 | 2007 |
| Single-cell multi-omics analysis of human pancreatic islets reveals novel cellular states in type 1 diabetes M Fasolino, GW Schwartz, AR Patil, A Mongia, ML Golson, YJ Wang, ... Nature metabolism 4 (2), 284-299, 2022 | 77 | 2022 |
| AB cell regulome links notch to downstream oncogenic pathways in small B cell lymphomas RJH Ryan, J Petrovic, DM Rausch, Y Zhou, CA Lareau, MJ Kluk, ... Cell reports 21 (3), 784-797, 2017 | 75 | 2017 |
| TooManyCells identifies and visualizes relationships of single-cell clades GW Schwartz, Y Zhou, J Petrovic, M Fasolino, L Xu, SM Shaffer, WS Pear, ... Nature methods 17 (4), 405-413, 2020 | 70 | 2020 |
| The pediatric cell atlas: defining the growth phase of human development at single-cell resolution DM Taylor, BJ Aronow, K Tan, K Bernt, N Salomonis, CS Greene, ... Developmental cell 49 (1), 10-29, 2019 | 63 | 2019 |
| Optimal constrained stationary intervention in gene regulatory networks B Faryabi, G Vahedi, JF Chamberland, A Datta, ER Dougherty EURASIP Journal on Bioinformatics and Systems Biology 2008, 1-10, 2008 | 55 | 2008 |
| Intervention in gene regulatory networks via a stationary mean-first-passage-time control policy G Vahedi, B Faryabi, JF Chamberland, A Datta, ER Dougherty IEEE Transactions on Biomedical Engineering 55 (10), 2319-2331, 2008 | 55 | 2008 |
| Optimal intervention in asynchronous genetic regulatory networks B Faryabi, JF Chamberland, G Vahedi, A Datta, ER Dougherty IEEE Journal of Selected Topics in Signal Processing 2 (3), 412-423, 2008 | 51 | 2008 |
| Genetic variation in type 1 diabetes reconfigures the 3D chromatin organization of T cells and alters gene expression M Fasolino, N Goldman, W Wang, B Cattau, Y Zhou, J Petrovic, VM Link, ... Immunity 52 (2), 257-274. e11, 2020 | 50 | 2020 |
| Functional proteogenomics reveals biomarkers and therapeutic targets in lymphomas DCM Rolland, V Basrur, YK Jeon, C McNeil-Schwalm, D Fermin, ... Proceedings of the National Academy of Sciences 114 (25), 6581-6586, 2017 | 44 | 2017 |
| The DNA damage-and transcription-associated protein paxip1 controls thymocyte development and emigration E Callen, RB Faryabi, M Luckey, B Hao, JA Daniel, W Yang, HW Sun, ... Immunity 37 (6), 971-985, 2012 | 43 | 2012 |
| Intervention in context-sensitive probabilistic Boolean networks revisited B Faryabi, G Vahedi, JF Chamberland, A Datta, ER Dougherty EURASIP Journal on Bioinformatics and Systems Biology 2009, 1-13, 2009 | 43 | 2009 |
Golnaz VahediAssociate Professor, University of Pennsylvania在 pennmedicine.upenn.edu 的电子邮件经过验证
