CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data P Lin, M Troup, JWK Ho Genome biology 18, 1-11, 2017 | 488 | 2017 |
Single-cell expression profiling reveals dynamic flux of cardiac stromal, vascular and immune cells in health and injury N Farbehi, R Patrick, A Dorison, M Xaymardan, V Janbandhu, ... Elife 8, e43882, 2019 | 468 | 2019 |
Comparative analysis of metazoan chromatin organization JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ... Nature 512 (7515), 449-452, 2014 | 419 | 2014 |
Testing and validating machine learning classifiers by metamorphic testing X Xie, JWK Ho, C Murphy, G Kaiser, B Xu, TY Chen Journal of Systems and Software 84 (4), 544-558, 2011 | 418 | 2011 |
NAD deficiency, congenital malformations, and niacin supplementation H Shi, A Enriquez, M Rapadas, EMMA Martin, R Wang, J Moreau, CK Lim, ... New England Journal of Medicine 377 (6), 544-552, 2017 | 232 | 2017 |
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis JWK Ho, E Bishop, PV Karchenko, N Nègre, KP White, PJ Park BMC genomics 12, 1-12, 2011 | 210 | 2011 |
Impact of sequencing depth in ChIP-seq experiments YL Jung, LJ Luquette, JWK Ho, F Ferrari, M Tolstorukov, A Minoda, ... Nucleic acids research 42 (9), e74-e74, 2014 | 200 | 2014 |
An innovative approach for testing bioinformatics programs using metamorphic testing TY Chen, JWK Ho, H Liu, X Xie BMC bioinformatics 10, 1-12, 2009 | 199 | 2009 |
Differential variability analysis of gene expression and its application to human diseases JWK Ho, M Stefani, CG Dos Remedios, MA Charleston Bioinformatics 24 (13), i390-i398, 2008 | 176 | 2008 |
Male-lineage transmission of an acquired metabolic phenotype induced by grand-paternal obesity JE Cropley, SA Eaton, A Aiken, PE Young, E Giannoulatou, JWK Ho, ... Molecular metabolism 5 (8), 699-708, 2016 | 171 | 2016 |
Heart failure–associated changes in RNA splicing of sarcomere genes SW Kong, YW Hu, JWK Ho, S Ikeda, S Polster, R John, JL Hall, E Bisping, ... Circulation: Cardiovascular Genetics 3 (2), 138-146, 2010 | 160 | 2010 |
Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci SJ Zacharek, CM Fillmore, AN Lau, DW Gludish, A Chou, JWK Ho, ... Cell stem cell 9 (3), 272-281, 2011 | 154 | 2011 |
Application of metamorphic testing to supervised classifiers X Xie, J Ho, C Murphy, G Kaiser, B Xu, TY Chen 2009 Ninth International Conference on Quality Software, 135-144, 2009 | 129 | 2009 |
A Wnt-bmp feedback circuit controls intertissue signaling dynamics in tooth organogenesis DJ O’Connell, JWK Ho, T Mammoto, A Turbe-Doan, JT O’Connell, ... Science signaling 5 (206), ra4-ra4, 2012 | 117 | 2012 |
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ... Genome research 23 (6), 917-927, 2013 | 107 | 2013 |
Targeted next-generation sequencing identifies pathogenic variants in familial congenital heart disease GM Blue, EP Kirk, E Giannoulatou, SL Dunwoodie, JWK Ho, DCK Hilton, ... Journal of the American College of Cardiology 64 (23), 2498-2506, 2014 | 104 | 2014 |
iSyTE: integrated Systems Tool for Eye gene discovery SA Lachke, JWK Ho, GV Kryukov, DJ O'Connell, A Aboukhalil, ML Bulyk, ... Investigative ophthalmology & visual science 53 (3), 1617-1627, 2012 | 104 | 2012 |
Assessment of intratumoral and peritumoral computed tomography radiomics for predicting pathological complete response to neoadjuvant chemoradiation in patients with esophageal … Y Hu, C Xie, H Yang, JWK Ho, J Wen, L Han, KWH Chiu, J Fu, ... JAMA network open 3 (9), e2015927-e2015927, 2020 | 100 | 2020 |
Computed tomography-based deep-learning prediction of neoadjuvant chemoradiotherapy treatment response in esophageal squamous cell carcinoma Y Hu, C Xie, H Yang, JWK Ho, J Wen, L Han, KO Lam, IYH Wong, ... Radiotherapy and Oncology 154, 6-13, 2021 | 99 | 2021 |
Host and microbiome multi-omics integration: applications and methodologies Q Wang, K Wang, W Wu, E Giannoulatou, JWK Ho, L Li Biophysical reviews 11 (1), 55-65, 2019 | 93 | 2019 |