TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining C Chen, Y Wu, J Li, X Wang, Z Zeng, J Xu, Y Liu, J Feng, H Chen, Y He, ... Molecular plant 16 (11), 1733-1742, 2023 | 416 | 2023 |
Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type Q Xu, Y Liu, A Zhu, X Wu, J Ye, K Yu, W Guo, X Deng BMC genomics 11, 1-17, 2010 | 170 | 2010 |
PhasiRNAs in plants: their biogenesis, genic sources, and roles in stress responses, development, and reproduction Y Liu, C Teng, R Xia, BC Meyers Plant Cell 32 (10), 3059-3080, 2020 | 151 | 2020 |
Genomewide analysis of small RNA s in nonembryogenic and embryogenic tissues of citrus: micro RNA‐and si RNA‐mediated transcript cleavage involved in somatic embryogenesis XM Wu, SJ Kou, YL Liu, YN Fang, Q Xu, WW Guo Plant biotechnology journal 13 (3), 383-394, 2015 | 104 | 2015 |
Evolution of self-compatibility by a mutant Sm-RNase in citrus M Liang, Z Cao, A Zhu, Y Liu, M Tao, H Yang, Q Xu Jr, S Wang, J Liu, Y Li, ... Nature plants 6 (2), 131-142, 2020 | 97 | 2020 |
Selection and validation of suitable reference genes for miRNA expression normalization by quantitative RT-PCR in citrus somatic embryogenic and adult tissues SJ Kou, XM Wu, Z Liu, YL Liu, Q Xu, WW Guo Plant Cell Reports 31, 2151-2163, 2012 | 84 | 2012 |
Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange Y Liu, L Wang, D Chen, X Wu, D Huang, L Chen, L Li, X Deng, Q Xu BMC genomics 15, 1-15, 2014 | 74 | 2014 |
Micro RNA 528, a hub regulator modulating ROS homeostasis via targeting of a diverse set of genes encoding copper‐containing proteins in monocots H Zhu, C Chen, J Zeng, Z Yun, Y Liu, H Qu, Y Jiang, X Duan, R Xia New Phytologist 225 (1), 385-399, 2020 | 67 | 2020 |
Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit … J Xu, H Xu, Y Liu, X Wang, Q Xu, X Deng Frontiers in plant science 6, 607, 2015 | 63 | 2015 |
miR3954 is a trigger of phasi RNA s that affects flowering time in citrus Y Liu, L Ke, G Wu, Y Xu, X Wu, R Xia, X Deng, Q Xu The Plant Journal 92 (2), 263-275, 2017 | 50 | 2017 |
Taxon-specific, phased siRNAs underlie a speciation locus in monkeyflowers M Liang, W Chen, AM LaFountain, Y Liu, F Peng, R Xia, HD Bradshaw, ... Science 379 (6632), 576-582, 2023 | 49 | 2023 |
Coupling of micro RNA‐directed phased small interfering RNA generation from long noncoding genes with alternative splicing and alternative polyadenylation in small RNA‐mediated … W Ma, C Chen, Y Liu, M Zeng, BC Meyers, J Li, R Xia New Phytologist 217 (4), 1535-1550, 2018 | 49 | 2018 |
Long non-coding RNAs, the dark matter: an emerging regulatory component in plants M Waseem, Y Liu, R Xia International Journal of Molecular Sciences 22 (1), 86, 2020 | 46 | 2020 |
MicroRNA482/2118, a miRNA superfamily essential for both disease resistance and plant development Y Zhang, M Waseem, Z Zeng, J Xu, C Chen, Y Liu, J Zhai, R Xia New Phytologist 233 (5), 2047-2057, 2022 | 42 | 2022 |
Evolutionary dynamics of linc RNA transcription in nine citrus species L Ke, Z Zhou, XW Xu, X Wang, Y Liu, Y Xu, Y Huang, S Wang, X Deng, ... The Plant Journal 98 (5), 912-927, 2019 | 27 | 2019 |
Comprehensive characterization of miRNA and PHAS loci in the diploid strawberry (Fragaria vesca) genome L Feng, R Xia, Y Liu Horticultural Plant Journal 5 (6), 255-267, 2019 | 19 | 2019 |
Jack of many trades: the multifaceted role of miR528 in monocots C Chen, Y Liu, R Xia Molecular Plant 12 (8), 1044-1046, 2019 | 16 | 2019 |
The GRAS gene family and its roles in seed development in litchi (Litchi chinensis Sonn) J Chen, Q Yan, J Li, L Feng, Y Zhang, J Xu, R Xia, Z Zeng, Y Liu BMC Plant Biology 21, 1-15, 2021 | 9 | 2021 |
Species-specific regulatory pathways of small RNAs play sophisticated roles in flower development in Dimocarpus longan Lour. B Liu, G Li, C Chen, Z Zeng, J Xu, J Zhang, R Xia, Y Liu Horticultural Plant Journal 9 (2), 237-249, 2023 | 6 | 2023 |
microRNA-mediated regulation in fruit quality X Huang, R Xia, Y Liu Current Opinion in Food Science 46, 100837, 2022 | 5 | 2022 |