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Carson Holt
Carson Holt
在 genetics.utah.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes
BL Cantarel, I Korf, SMC Robb, G Parra, E Ross, B Moore, C Holt, ...
Genome research 18 (1), 188-196, 2008
18482008
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
C Holt, M Yandell
BMC bioinformatics 12, 1-14, 2011
18292011
Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution
JJ Smith, S Kuraku, C Holt, T Sauka-Spengler, N Jiang, MS Campbell, ...
Nature genetics 45 (4), 415-421, 2013
6992013
Genome annotation and curation using MAKER and MAKER‐P
MS Campbell, C Holt, B Moore, M Yandell
Current protocols in bioinformatics 48 (1), 4.11. 1-4.11. 39, 2014
6352014
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu, MW Crepeau, ...
Genome biology 15, 1-13, 2014
5512014
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
CA Lévesque, H Brouwer, L Cano, JP Hamilton, C Holt, E Huitema, ...
Genome biology 11, 1-22, 2010
4252010
MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations
MS Campbell, MY Law, C Holt, JC Stein, GD Moghe, DE Hufnagel, J Lei, ...
Plant physiology 164 (2), 513-524, 2014
4142014
Genomic signatures of evolutionary transitions from solitary to group living
KM Kapheim, H Pan, C Li, SL Salzberg, D Puiu, T Magoc, HM Robertson, ...
Science 348 (6239), 1139-1143, 2015
3922015
Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile)
CD Smith, A Zimin, C Holt, E Abouheif, R Benton, E Cash, V Croset, ...
Proceedings of the National Academy of Sciences 108 (14), 5673-5678, 2011
3302011
Draft genome of the red harvester ant Pogonomyrmex barbatus
CR Smith, CD Smith, HM Robertson, M Helmkampf, A Zimin, M Yandell, ...
Proceedings of the National Academy of Sciences 108 (14), 5667-5672, 2011
3022011
The Genome Sequence of the Leaf-Cutter Ant Atta cephalotes Reveals Insights into Its Obligate Symbiotic Lifestyle
G Suen, C Teiling, L Li, C Holt, E Abouheif, E Bornberg-Bauer, P Bouffard, ...
PLoS genetics 7 (2), e1002007, 2011
2922011
The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution
JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath, HJ Parker, ...
Nature genetics 50 (2), 270-277, 2018
2802018
Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation
JL Wegrzyn, JD Liechty, KA Stevens, LS Wu, CA Loopstra, ...
Genetics 196 (3), 891-909, 2014
2512014
The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences
A Kovach, JL Wegrzyn, G Parra, C Holt, GE Bruening, CA Loopstra, ...
BMC genomics 11, 1-14, 2010
1742010
Amyloid-β 11C-PiB-PET imaging results from 2 randomized bapineuzumab phase 3 AD trials
E Liu, ME Schmidt, R Margolin, R Sperling, R Koeppe, NS Mason, ...
Neurology 85 (8), 692-700, 2015
1672015
Quantitative measures for the management and comparison of annotated genomes
K Eilbeck, B Moore, C Holt, M Yandell
BMC bioinformatics 10, 1-15, 2009
1562009
The Douglas-fir genome sequence reveals specialization of the photosynthetic apparatus in Pinaceae
DB Neale, PE McGuire, NC Wheeler, KA Stevens, MW Crepeau, ...
G3: Genes, Genomes, Genetics 7 (9), 3157-3167, 2017
1042017
First fungal genome sequence from Africa: a preliminary analysis
BD Wingfield, ET Steenkamp, QC Santana, MPA Coetzee, S Bam, ...
South African Journal of Science 108 (1), 1-9, 2012
662012
Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)
C Holt, M Campbell, DA Keays, N Edelman, A Kapusta, E Maclary, ...
G3: Genes, Genomes, Genetics 8 (5), 1391-1398, 2018
582018
Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes
MY Law, KL Childs, MS Campbell, JC Stein, AJ Olson, C Holt, N Panchy, ...
Plant physiology 167 (1), 25-39, 2015
552015
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