| Genome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci Q Rao, PA Rollat-Farnier, DT Zhu, D Santos-Garcia, FJ Silva, A Moya, ... BMC genomics 16, 1-13, 2015 | 126 | 2015 |
| Endosymbiosis in trypanosomatids: the genomic cooperation between bacterium and host in the synthesis of essential amino acids is heavily influenced by multiple horizontal gene … JMP Alves, CC Klein, FM da Silva, AG Costa-Martins, MG Serrano, ... BMC evolutionary biology 13, 1-20, 2013 | 84 | 2013 |
| High prevalence of Neisseria meningitidis hypervirulent lineages and emergence of W135: P1. 5, 2: ST-11 clone in Southern Brazil L Weidlich, LF Baethgen, LW Mayer, C Moraes, CC Klein, LS Nunes, ... Journal of Infection 57 (4), 324-331, 2008 | 81 | 2008 |
| Predicting the Proteins of Angomonas deanei, Strigomonas culicis and Their Respective Endosymbionts Reveals New Aspects of the Trypanosomatidae Family MCM Motta, ACA Martins, SSA de Souza, CMC Catta-Preta, R Silva, ... PloS one 8 (4), e60209, 2013 | 67 | 2013 |
| An integrative, multi-omics approach towards the prioritization of Klebsiella pneumoniae drug targets PIP Ramos, D Fernandez Do Porto, E Lanzarotti, EJ Sosa, G Burguener, ... Scientific reports 8 (1), 10755, 2018 | 65 | 2018 |
| Damage-responsive elements in Drosophila regeneration E Vizcaya-Molina, CC Klein, F Serras, RK Mishra, R Guigó, M Corominas Genome research 28 (12), 1852-1866, 2018 | 64 | 2018 |
| Biosynthesis of vitamins and cofactors in bacterium-harbouring trypanosomatids depends on the symbiotic association as revealed by genomic analyses CC Klein, JMP Alves, MG Serrano, GA Buck, ATR Vasconcelos, MF Sagot, ... PLoS One 8 (11), e79786, 2013 | 62 | 2013 |
| AtlasT4SS: a curated database for type IV secretion systems RC Souza, G del Rosario Quispe Saji, MOC Costa, DS Netto, NCB Lima, ... BMC microbiology 12, 1-11, 2012 | 50 | 2012 |
| Epidemiology of meningococcal disease in southern Brazil from 1995 to 2003, and molecular characterization of Neisseria meningitidis using multilocus sequence … LF Baethgen, L Weidlich, C Moraes, C Klein, LS Nunes, PI Cafrune, ... Tropical Medicine & International Health 13 (1), 31-40, 2008 | 50 | 2008 |
| Structural and dynamical analysis of biological networks C Klein, A Marino, MF Sagot, P Vieira Milreu, M Brilli Briefings in functional genomics 11 (6), 420-433, 2012 | 44 | 2012 |
| Genomic and functional conservation of lncRNAs: lessons from flies C Camilleri-Robles, R Amador, CC Klein, R Guigó, M Corominas, ... Mammalian Genome 33 (2), 328-342, 2022 | 30 | 2022 |
| Enumeration of minimal stoichiometric precursor sets in metabolic networks R Andrade, M Wannagat, CC Klein, V Acuña, A Marchetti-Spaccamela, ... Algorithms for Molecular Biology 11, 1-15, 2016 | 30 | 2016 |
| Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure PV Milreu, CC Klein, L Cottret, V Acuna, E Birmele, M Borassi, C Junot, ... Bioinformatics 30 (1), 61-70, 2014 | 30 | 2014 |
| The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome FDE De Palma, V Del Monaco, JG Pol, M Kremer, V D’argenio, G Stoll, ... Pharmacological Research 161, 105249, 2020 | 18 | 2020 |
| Exploration of the core metabolism of symbiotic bacteria CC Klein, L Cottret, J Kielbassa, H Charles, C Gautier, ... BMC genomics 13, 1-17, 2012 | 16 | 2012 |
| Mitochondrial respiration and genomic analysis provide insight into the influence of the symbiotic bacterium on host trypanosomatid oxygen consumption AC Azevedo-Martins, ACL Machado, CC Klein, L Ciapina, L Gonzaga, ... Parasitology 142 (2), 352-362, 2015 | 15 | 2015 |
| bsAS, an antisense long non-coding RNA, essential for correct wing development through regulation of blistered/DSRF isoform usage S Pérez-Lluch, CC Klein, A Breschi, M Ruiz-Romero, A Abad, E Palumbo, ... PLoS genetics 16 (12), e1009245, 2020 | 9 | 2020 |
| Dynamics of gene expression and chromatin marking during cell state transition B Borsari, A Abad, CC Klein, R Nurtdinov, A Esteban, E Palumbo, ... BioRxiv, 2020.11. 20.391524, 2020 | 4 | 2020 |
| A transcriptional program shared across lineages underlies cell differentiation during metazoan development M Ruiz-Romero, CC Klein, S Pérez-Lluch, A Abad, A Breschi, R Guigó bioRxiv, 2022.04. 22.489139, 2022 | 3 | 2022 |
| Chromatin dynamics in regeneration epithelia: Lessons from Drosophila imaginal discs E Vizcaya-Molina, CC Klein, F Serras, M Corominas Seminars in Cell & Developmental Biology 97, 55-62, 2020 | 2 | 2020 |
