Points of significance: Principal component analysis J Lever, M Krzywinski, N Altman Nature methods 14 (7), 641-643, 2017 | 1341 | 2017 |
Points of significance: Model selection and overfitting J Lever, M Krzywinski, N Altman Nature Methods 13 (9), 703, 2016 | 620 | 2016 |
Points of significance: Classification evaluation J Lever, M Krzywinski, N Altman Nature methods 13 (8), 603-604, 2016 | 376* | 2016 |
CancerMine: a literature-mined resource for drivers, oncogenes and tumor suppressors in cancer J Lever, EY Zhao, J Grewal, MR Jones, SJM Jones Nature methods 16 (6), 505-507, 2019 | 153 | 2019 |
Points of significance: Logistic regression J Lever, M Krzywinski, N Altman Nature Methods 13 (7), 541-542, 2016 | 113* | 2016 |
Identification and analyses of extra-cranial and cranial rhabdoid tumor molecular subgroups reveal tumors with cytotoxic T cell infiltration HJE Chun, PD Johann, K Milne, M Zapatka, A Buellesbach, N Ishaque, ... Cell reports 29 (8), 2338-2354. e7, 2019 | 84 | 2019 |
Points of significance: Regularization J Lever, M Krzywinski, N Altman Nature methods 13 (10), 803-804, 2016 | 53 | 2016 |
Small molecule epigenetic screen identifies novel EZH2 and HDAC inhibitors that target glioblastoma brain tumor-initiating cells N Grinshtein, CC Rioseco, R Marcellus, D Uehling, A Aman, X Lun, ... Oncotarget 7 (37), 59360, 2016 | 50 | 2016 |
Comparative genomic and genetic analysis of glioblastoma-derived brain tumor-initiating cells and their parent tumors B Davis, Terry Fox Research Institute Glioblastoma Consortium, Y Shen, ... Neuro-oncology 18 (3), 350-360, 2015 | 50 | 2015 |
Comprehensive genomic profiling of glioblastoma tumors, BTICs, and xenografts reveals stability and adaptation to growth environments Y Shen, CJ Grisdale, SA Islam, P Bose, J Lever, EY Zhao, N Grinshtein, ... Proceedings of the National Academy of Sciences 116 (38), 19098-19108, 2019 | 48 | 2019 |
Text-mining clinically relevant cancer biomarkers for curation into the CIViC database J Lever, MR Jones, AM Danos, K Krysiak, M Bonakdar, JK Grewal, ... Genome medicine 11, 1-16, 2019 | 39 | 2019 |
VERSE: Event and relation extraction in the BioNLP 2016 Shared Task J Lever, SJM Jones Proceedings of the 4th BioNLP shared task workshop, 42-49, 2016 | 39 | 2016 |
Analyzing the vast coronavirus literature with CoronaCentral J Lever, RB Altman Proceedings of the National Academy of Sciences 118 (23), e2100766118, 2021 | 34 | 2021 |
A collaborative filtering-based approach to biomedical knowledge discovery J Lever, S Gakkhar, M Gottlieb, T Rashnavadi, S Lin, C Siu, M Smith, ... Bioinformatics 34 (4), 652-659, 2018 | 31 | 2018 |
LIONS: analysis suite for detecting and quantifying transposable element initiated transcription from RNA-seq A Babaian, IR Thompson, J Lever, L Gagnier, MM Karimi, DL Mager Bioinformatics 35 (19), 3839-3841, 2019 | 27 | 2019 |
Painless relation extraction with kindred J Lever, SJM Jones BioNLP 2017, 176-183, 2017 | 17 | 2017 |
PGxMine: text mining for curation of PharmGKB J Lever, JM Barbarino, L Gong, R Huddart, K Sangkuhl, R Whaley, ... PACIFIC SYMPOSIUM ON BIOCOMPUTING 2020, 611-622, 2019 | 14 | 2019 |
CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase K Krysiak, AM Danos, J Saliba, JF McMichael, AC Coffman, S Kiwala, ... Nucleic acids research 51 (D1), D1230-D1241, 2023 | 12 | 2023 |
Real-time controllable fire using textured forces J Lever, T Komura The Visual Computer, 1-10, 2012 | 11 | 2012 |
Correction: Corrigendum: Classification evaluation J Lever, M Krzywinski, N Altman Nature Methods 13 (10), 890-890, 2016 | 9 | 2016 |