LitGene: a transformer-based model that uses contrastive learning to integrate textual information into gene representations A Jararweh, O Macaulay, D Arredondo, OM Oyebamiji, Y Hu, L Tafoya, ... bioRxiv, 2024.08. 07.606674, 2024 | | 2024 |
GeneLLM: Unveiling gene functions through literature-driven transformer embeddings A Jararweh, K Virupakshappa, OS Macaulay, A Segura, OM Oyebamiji, ... Cancer Research 84 (6_Supplement), 3534-3534, 2024 | | 2024 |
DeepVul: A Multi-Task Transformer Model for Joint Prediction of Gene Essentiality and Drug Response A Jararweh, D Arredondo, O Macaulay, M Dicome, L Tafoya, Y Hu, ... bioRxiv, 2024.10. 17.618944, 2024 | | 2024 |
MedGraphNet: Leveraging Multi-Relational Graph Neural Networks and Text Knowledge for Biomedical Predictions O Macaulay, M Servilla, K Virupakshappa, D Arredondo, Y Hu, L Tafoya, ... bioRxiv, 2024.09. 24.614782, 2024 | | 2024 |
Unveiling Zero Shot Prediction for Gene Attributes Through Interpretable AI A Jararweh, O Macaulay, D Arredondo, O Oyebamiji, LE Tafoya, ... ICLR 2024 Workshop on Machine Learning for Genomics Explorations, 0 | | |