| SARS-CoV-2 Nsp16 activation mechanism and a cryptic pocket with pan-coronavirus antiviral potential N Vithani, MD Ward, MI Zimmerman, B Novak, JH Borowsky, S Singh, ... Biophysical Journal 120 (14), 2880-2889, 2021 | 80 | 2021 |
| Mechanism of BRAF activation through biochemical characterization of the recombinant full‐length protein N Cope, C Candelora, K Wong, S Kumar, H Nan, M Grasso, B Novak, Y Li, ... Chembiochem 19 (18), 1988-1997, 2018 | 46 | 2018 |
| Analyses of the oncogenic BRAFD594G variant reveal a kinase-independent function of BRAF in activating MAPK signaling NJ Cope, B Novak, Z Liu, M Cavallo, AY Gunderwala, M Connolly, ... Journal of Biological Chemistry 295 (8), 2407-2420, 2020 | 25 | 2020 |
| Drug specificity and affinity are encoded in the probability of cryptic pocket opening in myosin motor domains A Meller, JM Lotthammer, LG Smith, B Novak, LA Lee, CC Kuhn, ... Elife 12, e83602, 2023 | 22 | 2023 |
| Biochemical Characterization of Full‐Length Oncogenic BRAFV600E together with Molecular Dynamics Simulations Provide Insight into the Activation and … N Cope, B Novak, C Candelora, K Wong, M Cavallo, A Gunderwala, Z Liu, ... Chembiochem 20 (22), 2850-2861, 2019 | 11 | 2019 |
| Accurate host–guest binding free energies using the AMOEBA polarizable force field MKJ Chung, RJ Miller, B Novak, Z Wang, JW Ponder Journal of chemical information and modeling 63 (9), 2769-2782, 2023 | 10 | 2023 |
| PopShift: A thermodynamically sound approach to estimate binding free energies by accounting for ligand-induced population shifts from a ligand-free MSM LG Smith, B Novak, M Osato, DL Mobley, GR Bowman Biophysical Journal 123 (3), 186a, 2024 | 5 | 2024 |
| Drug specificity and affinity are encoded in the probability of cryptic pocket opening in myosin motor domains A Meller, JM Lotthammer, LG Smith, B Novak, LA Lee, CC Kuhn, ... bioRxiv, 2022.09. 05.506254, 2022 | 1 | 2022 |
| Cover Feature: Biochemical Characterization of Full‐Length Oncogenic BRAFV600E together with Molecular Dynamics Simulations Provide Insight into the … N Cope, B Novak, C Candelora, K Wong, M Cavallo, A Gunderwala, Z Liu, ... ChemBioChem 20 (22), 2802-2802, 2019 | 1 | 2019 |
| High-throughput affinity measurements of direct interactions between activation domains and co-activators N DelRosso, PH Suzuki, D Griffith, JM Lotthammer, B Novak, S Kocalar, ... bioRxiv, 2024 | | 2024 |
| Benchmarking a novel ensemble docking method LG Smith, B Novak, GR Bowman Biophysical Journal 122 (3), 183a, 2023 | | 2023 |
| Characterizing blebbistatin pocket conformational dynamics with Markov state models B Novak, A Meller, G Bowman Biophysical Journal 121 (3), 260a, 2022 | | 2022 |
