dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms JB Puritz, CM Hollenbeck, JR Gold PeerJ 2, e431, 2014 | 493 | 2014 |
These aren’t the loci you’e looking for: Principles of effective SNP filtering for molecular ecologists SJ O'Leary, JB Puritz, SC Willis, CM Hollenbeck, DS Portnoy Molecular ecology 27 (16), 3193-3206, 2018 | 237 | 2018 |
Selection and sex‐biased dispersal in a coastal shark: the influence of philopatry on adaptive variation DS Portnoy, JB Puritz, CM Hollenbeck, J Gelsleichter, D Chapman, ... Molecular Ecology 24 (23), 5877-5885, 2015 | 118 | 2015 |
Genomic tools and selective breeding in molluscs CM Hollenbeck, IA Johnston Frontiers in Genetics 9, 253, 2018 | 114 | 2018 |
Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage SC Willis, CM Hollenbeck, JB Puritz, JR Gold, DS Portnoy Molecular ecology resources 17 (5), 955-965, 2017 | 95 | 2017 |
Contemporary population structure and post‐glacial genetic demography in a migratory marine species, the blacknose shark, Carcharhinus acronotus DS Portnoy, CM Hollenbeck, CN Belcher, WB Driggers, BS Frazier, ... Molecular ecology 23 (22), 5480-5495, 2014 | 78 | 2014 |
A method for detecting recent changes in contemporary effective population size from linkage disequilibrium at linked and unlinked loci CM Hollenbeck, DS Portnoy, JR Gold Heredity 117 (4), 207-216, 2016 | 70 | 2016 |
Evolution of population structure in an estuarine‐dependent marine fish CM Hollenbeck, DS Portnoy, JR Gold Ecology and Evolution 9 (6), 3141-3152, 2019 | 35 | 2019 |
Population structure, gene flow, and historical demography of a small coastal shark (Carcharhinus isodon) in US waters of the Western Atlantic Ocean DS Portnoy, CM Hollenbeck, DM Bethea, BS Frazier, J Gelsleichter, ... ICES Journal of Marine Science 73 (9), 2322-2332, 2016 | 32 | 2016 |
Parthenogenesis in a whitetip reef shark Triaenodon obesus involves a reduction in ploidy DS Portnoy, CM Hollenbeck, JS Johnston, HM Casman, JR Gold Journal of fish biology 85 (2), 502-508, 2014 | 28 | 2014 |
Does mating behaviour affect connectivity in marine fishes? Comparative population genetics of two protogynous groupers (Family Serranidae) DS Portnoy, CM Hollenbeck, MA Renshaw, NJ Cummings, JR Gold Molecular ecology 22 (2), 301-313, 2013 | 26 | 2013 |
Rapid genetic and morphologic divergence between captive and wild populations of the endangered Leon Springs pupfish, Cyprinodon bovinus AN Black, HA Seears, CM Hollenbeck, PB Samollow Molecular Ecology 26 (8), 2237-2256, 2017 | 24 | 2017 |
A genetic linkage map of red drum (Sciaenops ocellatus) and comparison of chromosomal syntenies with four other fish species CM Hollenbeck, DS Portnoy, JR Gold Aquaculture, 2014 | 24 | 2014 |
Phylogenetic relationships of tropical eastern Pacific snappers (Lutjanidae) inferred from mitochondrial DNA sequences JR Gold, SC Willis, MA Renshaw, A Buentello, HJ Walker Jr, JB Puritz, ... Systematics and Biodiversity 13 (6), 596-607, 2015 | 18 | 2015 |
Novel epigenetic age estimation in wild-caught Gulf of Mexico reef fishes DN Weber, AT Fields, WF Patterson III, BK Barnett, CM Hollenbeck, ... Canadian Journal of Fisheries and Aquatic Sciences 79 (1), 1-5, 2022 | 17 | 2022 |
Population structure of red snapper (Lutjanus campechanus) in US waters of the western Atlantic Ocean and the northeastern Gulf of Mexico CM Hollenbeck, DS Portnoy, E Saillant, JR Gold Fisheries Research 172, 17-25, 2015 | 17 | 2015 |
Linkage mapping and comparative genomics of red drum (Sciaenops ocellatus) using next-generation sequencing CM Hollenbeck, DS Portnoy, D Wetzel, TA Sherwood, PB Samollow, ... G3: Genes, Genomes, Genetics 7 (3), 843-850, 2017 | 15 | 2017 |
A genetic linkage map of red drum, Sciaenops ocellatus DS Portnoy, MA Renshaw, CM Hollenbeck, JR Gold Animal genetics 41 (6), 630-641, 2010 | 15 | 2010 |
Demonstration of the Use of Environmental DNA for the Non-Invasive Genotyping of a Bivalve Mollusk, the European Flat Oyster (Ostrea edulis) LE Holman, CM Hollenbeck, TJ Ashton, IA Johnston Frontiers in genetics 10, 1159, 2019 | 14 | 2019 |
Genetic mapping and comparative genomics to inform restoration enhancement and culture of southern flounder, Paralichthys lethostigma SJ O’Leary, CM Hollenbeck, RR Vega, JR Gold, DS Portnoy BMC genomics 19 (1), 1-11, 2018 | 12 | 2018 |