| MetaWRAP—a flexible pipeline for genome-resolved metagenomic data analysis GV Uritskiy, J DiRuggiero, J Taylor Microbiome 6, 1-13, 2018 | 1311 | 2018 |
| A predictive model for transcriptional control of physiology in a free living cell R Bonneau, MT Facciotti, DJ Reiss, AK Schmid, M Pan, A Kaur, ... Cell 131 (7), 1354-1365, 2007 | 363 | 2007 |
| Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology FT Robb, DL Maeder, JR Brown, J DiRuggiero, MD Stump, RK Yeh, ... Methods in enzymology 330, 134-157, 2001 | 295 | 2001 |
| Colonization patterns of soil microbial communities in the Atacama Desert A Crits-Christoph, CK Robinson, T Barnum, WF Fricke, AF Davila, ... Microbiome 1, 1-13, 2013 | 223 | 2013 |
| Transitory microbial habitat in the hyperarid Atacama Desert D Schulze-Makuch, D Wagner, SP Kounaves, K Mangelsdorf, KG Devine, ... Proceedings of the National Academy of Sciences 115 (11), 2670-2675, 2018 | 222 | 2018 |
| Physiological responses of the halophilic archaeon Halobacterium sp. strain NRC1 to desiccation and gamma irradiation M Kottemann, A Kish, C Iloanusi, S Bjork, J DiRuggiero Extremophiles 9, 219-227, 2005 | 206 | 2005 |
| Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1 NS Baliga, SJ Bjork, R Bonneau, M Pan, C Iloanusi, MCH Kottemann, ... Genome research 14 (6), 1025-1035, 2004 | 189 | 2004 |
| Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica J Goordial, A Davila, D Lacelle, W Pollard, MM Marinova, CW Greer, ... The ISME journal 10 (7), 1613-1624, 2016 | 178 | 2016 |
| Both RadA and RadB are involved in homologous recombination inPyrococcus furiosus K Komori, T Miyata, J DiRuggiero, R Holley-Shanks, I Hayashi, IKO Cann, ... Journal of Biological Chemistry 275 (43), 33782-33790, 2000 | 177 | 2000 |
| Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences DL Maeder, RB Weiss, DM Dunn, JL Cherry, JM González, J DiRuggiero, ... Genetics 152 (4), 1299-1305, 1999 | 168 | 1999 |
| Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus J DiRuggiero, N Santangelo, Z Nackerdien, J Ravel, FT Robb Journal of bacteriology 179 (14), 4643-4645, 1997 | 148 | 1997 |
| Archaeal binding protein-dependent ABC transporter: molecular and biochemical analysis of the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus … R Horlacher, KB Xavier, H Santos, J DiRuggiero, M Kossmann, W Boos Journal of bacteriology 180 (3), 680-689, 1998 | 146 | 1998 |
| Evidence of recent lateral gene transfer among hyperthermophilic archaea J DiRuggiero, D Dunn, DL Maeder, R Holley‐Shanks, J Chatard, ... Molecular microbiology 38 (4), 684-693, 2000 | 137 | 2000 |
| Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert J Wierzchos, J DiRuggiero, P Vítek, O Artieda, V Souza-Egipsy, P Škaloud, ... Frontiers in microbiology 6, 934, 2015 | 128 | 2015 |
| Microbial diversity and the presence of algae in halite endolithic communities are correlated to atmospheric moisture in the hyper‐arid zone of the A tacama D esert CK Robinson, J Wierzchos, C Black, A Crits‐Christoph, B Ma, J Ravel, ... Environmental microbiology 17 (2), 299-315, 2015 | 109 | 2015 |
| Microarray analysis of the hyperthermophilic archaeon Pyrococcus furiosus exposed to gamma irradiation E Williams, TM Lowe, J Savas, J DiRuggiero Extremophiles 11, 19-29, 2007 | 104 | 2007 |
| Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community A Crits‐Christoph, DR Gelsinger, B Ma, J Wierzchos, J Ravel, A Davila, ... Environmental microbiology 18 (6), 2064-2077, 2016 | 102 | 2016 |
| An integrated systems approach for understanding cellular responses to gamma radiation K Whitehead, A Kish, M Pan, A Kaur, DJ Reiss, N King, L Hohmann, ... Molecular systems biology 2 (1), 47, 2006 | 102 | 2006 |
| Across the tree of life, radiation resistance is governed by antioxidant Mn2+, gauged by paramagnetic resonance A Sharma, EK Gaidamakova, O Grichenko, VY Matrosova, V Hoeke, ... Proceedings of the National Academy of Sciences 114 (44), E9253-E9260, 2017 | 99 | 2017 |
| DNA repair systems in archaea: mementos from the last universal common ancestor? J DiRuggiero, JR Brown, AP Bogert, FT Robb Journal of molecular evolution 49, 474-484, 1999 | 93 | 1999 |
