Structural basis for substrate loading in bacterial RNA polymerase DG Vassylyev, MN Vassylyeva, J Zhang, M Palangat, I Artsimovitch, ... Nature 448 (7150), 163-168, 2007 | 414 | 2007 |
Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography JR Stagno, Y Liu, YR Bhandari, CE Conrad, S Panja, M Swain, L Fan, ... Nature 541 (7636), 242-246, 2017 | 295 | 2017 |
A central role of the RNA polymerase trigger loop in active-site rearrangement during transcriptional pausing I Toulokhonov, J Zhang, M Palangat, R Landick Molecular cell 27 (3), 406-419, 2007 | 242 | 2007 |
RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015 | 184 | 2015 |
Ribozymes and riboswitches: modulation of RNA function by small molecules J Zhang, MW Lau, AR Ferré-D’Amaré Biochemistry 49 (43), 9123-9131, 2010 | 176 | 2010 |
Role of the RNA polymerase trigger loop in catalysis and pausing J Zhang, M Palangat, R Landick Nature structural & molecular biology 17 (1), 99-104, 2010 | 166 | 2010 |
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA J Zhang, AR Ferré-D’Amaré Nature 500 (7462), 363-366, 2013 | 153 | 2013 |
A two-way street: regulatory interplay between RNA polymerase and nascent RNA structure J Zhang, R Landick Trends in biochemical sciences 41 (4), 293-310, 2016 | 136 | 2016 |
Synthesis and applications of RNAs with position-selective labelling and mosaic composition Y Liu, E Holmstrom, J Zhang, P Yu, J Wang, MA Dyba, D Chen, J Ying, ... Nature 522 (7556), 368-372, 2015 | 112 | 2015 |
The tRNA elbow in structure, recognition and evolution J Zhang, AR Ferré-D’Amaré Life 6 (1), 3, 2016 | 90 | 2016 |
Interaction between the tRNA-binding and C-terminal domains of Yeast Gcn2 regulates kinase activity in vivo S Lageix, J Zhang, S Rothenburg, AG Hinnebusch PLoS genetics 11 (2), e1004991, 2015 | 65 | 2015 |
Direct evaluation of tRNA aminoacylation status by the T-box riboswitch using tRNA-mRNA stacking and steric readout J Zhang, AR Ferré-D’Amaré Molecular cell 55 (1), 148-155, 2014 | 60 | 2014 |
Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions S Li, Z Su, J Lehmann, V Stamatopoulou, N Giarimoglou, FE Henderson, ... Nature structural & molecular biology 26 (12), 1094-1105, 2019 | 59 | 2019 |
Dramatic improvement of crystals of large RNAs by cation replacement and dehydration J Zhang, AR Ferré-D’Amaré Structure 22 (9), 1363-1371, 2014 | 57 | 2014 |
The search for a PKR code—differential regulation of protein kinase R activity by diverse RNA and protein regulators C Bou-Nader, JM Gordon, FE Henderson, J Zhang Rna 25 (5), 539-556, 2019 | 56 | 2019 |
YbxF and YlxQ are bacterial homologs of L7Ae and bind K-turns but not K-loops NJ Baird, J Zhang, T Hamma, AR Ferré-D'Amaré Rna 18 (4), 759-770, 2012 | 55 | 2012 |
Structure and mechanism of the T‐box riboswitches J Zhang, AR Ferré‐D'Amaré Wiley Interdisciplinary Reviews: RNA 6 (4), 419-433, 2015 | 52 | 2015 |
Global analysis of riboswitches by small-angle X-ray scattering and calorimetry J Zhang, CP Jones, AR Ferré-D'Amaré Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1839 (10 …, 2014 | 52 | 2014 |
New molecular engineering approaches for crystallographic studies of large RNAs J Zhang, AR Ferré-D’Amaré Current opinion in structural biology 26, 9-15, 2014 | 49 | 2014 |
Structural basis of R-loop recognition by the S9. 6 monoclonal antibody C Bou-Nader, A Bothra, DN Garboczi, SH Leppla, J Zhang Nature communications 13 (1), 1641, 2022 | 46 | 2022 |