Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees B Subramanian, S Gao, MJ Lercher, S Hu, WH Chen Nucleic acids research 47 (W1), W270-W275, 2019 | 612 | 2019 |
Proteome organization in a genome-reduced bacterium S Kuhner, V van Noort, MJ Betts, A Leo-Macias, C Batisse, M Rode, ... Science 326 (5957), 1235, 2009 | 572 | 2009 |
Rapid detection of COVID-19 coronavirus using a reverse transcriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic platform L Yu, S Wu, X Hao, X Dong, L Mao, V Pelechano, WH Chen, X Yin Clinical chemistry 66 (7), 975-977, 2020 | 555 | 2020 |
Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees Z He, H Zhang, S Gao, MJ Lercher, WH Chen, S Hu Nucleic acids research 44 (W1), W236-W241, 2016 | 554 | 2016 |
Transcriptome complexity in a genome-reduced bacterium M Guell, V van Noort, E Yus, WH Chen, J Leigh-Bell, K Michalodimitrakis, ... Science 326 (5957), 1268, 2009 | 519 | 2009 |
Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote G Schönknecht, WH Chen, CM Ternes, GG Barbier, RP Shrestha, ... Science 339 (6124), 1207-1210, 2013 | 504 | 2013 |
EvolView, an online tool for visualizing, annotating and managing phylogenetic trees H Zhang, S Gao, MJ Lercher, S Hu, WH Chen Nucleic acids research 40 (W1), W569-W572, 2012 | 445 | 2012 |
Impact of genome reduction on bacterial metabolism and its regulation E Yus, T Maier, K Michalodimitrakis, V van Noort, T Yamada, WH Chen, ... Science 326 (5957), 1263, 2009 | 371 | 2009 |
OGEE: an online gene essentiality database WH Chen, P Minguez, MJ Lercher, P Bork Nucleic acids research 40 (D1), D901-D906, 2012 | 203 | 2012 |
OGEE v2: an update of the online gene essentiality database with special focus on differentially essential genes in human cancer cell lines WH Chen, G Lu, X Chen, XM Zhao, P Bork Nucleic acids research, gkw1013, 2016 | 177 | 2016 |
Defining a minimal cell: essentiality of small ORF s and nc RNA s in a genome‐reduced bacterium M Lluch‐Senar, J Delgado, WH Chen, V Lloréns‐Rico, FJ O'Reilly, ... Molecular systems biology 11 (1), 780, 2015 | 156 | 2015 |
Orthology prediction methods: a quality assessment using curated protein families K Trachana, TA Larsson, S Powell, WH Chen, T Doerks, J Muller, P Bork Bioessays 33 (10), 769-780, 2011 | 150 | 2011 |
Bacterial antisense RNAs are mainly the product of transcriptional noise V Lloréns-Rico, J Cano, T Kamminga, R Gil, A Latorre, WH Chen, P Bork, ... Science advances 2 (3), e1501363, 2016 | 118 | 2016 |
GMrepo: a database of curated and consistently annotated human gut metagenomes S Wu, C Sun, Y Li, T Wang, L Jia, S Lai, Y Yang, P Luo, D Dai, YQ Yang, ... Nucleic acids research 48 (D1), D545-D553, 2020 | 110 | 2020 |
Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age WH Chen, K Trachana, MJ Lercher, P Bork Molecular biology and evolution 29 (7), 1703-1706, 2012 | 95 | 2012 |
Energy efficiency trade-offs drive nucleotide usage in transcribed regions WH Chen, G Lu, P Bork, S Hu, MJ Lercher Nature communications 7 (1), 11334, 2016 | 92 | 2016 |
MVP: a microbe–phage interaction database NL Gao, C Zhang, Z Zhang, S Hu, MJ Lercher, XM Zhao, P Bork, Z Liu, ... Nucleic acids research 46 (D1), D700-D707, 2018 | 70 | 2018 |
An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum T Bock, WH Chen, A Ori, N Malik, N Silva-Martin, J Huerta-Cepas, ... Nucleic acids research, gku1147, 2014 | 66 | 2014 |
GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison D Dai, J Zhu, C Sun, M Li, J Liu, S Wu, K Ning, L He, XM Zhao, WH Chen Nucleic acids research 50 (D1), D777-D784, 2022 | 64 | 2022 |
Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines X Ge, W Chen, S Song, W Wang, S Hu, J Yu BMC plant biology 8, 1-20, 2008 | 61 | 2008 |