| Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells EL Putiri, RL Tiedemann, JJ Thompson, C Liu, T Ho, JH Choi, ... Genome biology 15 (6), R81, 2014 | 122 | 2014 |
| Distinctive epigenomes characterize glioma stem cells and their response to differentiation cues D Zhou, BM Alver, S Li, RA Hlady, JJ Thompson, MA Schroeder, JH Lee, ... Genome biology 19 (1), 43, 2018 | 97 | 2018 |
| Integrating the Epigenome to Identify Drivers of Hepatocellular Carcinoma RA Hlady, A Sathyanarayan, JJ Thompson, D Zhou, Q Wu, K Pham, ... Hepatology 69 (2), 639-652, 2019 | 78 | 2019 |
| ZBTB24 is a transcriptional regulator that coordinates with DNMT3B to control DNA methylation JJ Thompson, R Kaur, CP Sosa, JH Lee, K Kashiwagi, D Zhou, ... Nucleic acids research 46 (19), 10034-10051, 2018 | 58 | 2018 |
| Chromosomal aneuploidies induced upon Lamin B2 depletion are mislocalized in the interphase nucleus D Ranade, S Koul, J Thompson, KB Prasad, K Sengupta Chromosoma 126 (2), 223-244, 2017 | 33 | 2017 |
| Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation DB Beck, MA Basar, AJ Asmar, JJ Thompson, H Oda, DT Uehara, K Saida, ... Science advances 7 (4), eabe2116, 2021 | 32 | 2021 |
| Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages JJ Thompson, DJ Lee, A Mitra, S Frail, RK Dale, PP Rocha Nature Communications 13 (1), 1-18, 2022 | 31 | 2022 |
| MLL3/MLL4 methyltransferase activities control early embryonic development and embryonic stem cell differentiation in a lineage-selective manner G Xie, JE Lee, AD Senft, YK Park, Y Jang, S Chakraborty, JJ Thompson, ... Nature Genetics, 1-13, 2023 | 24 | 2023 |
| An epigenome atlas of neural progenitors within the embryonic mouse forebrain CT Rhodes, JJ Thompson, A Mitra, D Asokumar, DR Lee, DJ Lee, ... | 19 | 2021 |
| Rapid redistribution and extensive binding of NANOG and GATA6 at shared regulatory elements underlie specification of divergent cell fates JJ Thompson, DJ Lee, A Mitra, S Frail, R Dale, PP Rocha bioRxiv, 2021 | 4 | 2021 |
| Misregulation of DNA methylation regulators in cancer JJ Thompson, KD Robertson DNA and Histone Methylation as Cancer Targets, 97-124, 2017 | 4 | 2017 |
| Regulation of human development by ubiquitin chain editing of chromatin remodelers D Beck, MA Basar, AJ Asmar, J Thompson, H Oda, DT Uehara, K Saida, ... BioRxiv, 2020 | 2 | 2020 |
| Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development S Chakraborty, N Wenzlitschke, MJ Anderson, A Eraso, M Baudic, ... bioRxiv, 2024.08. 03.606480, 2024 | | 2024 |
| Single cell chromatin accessibility reveals regulatory elements and developmental trajectories in the embryonic forebrain CT Rhodes, A Mitra, DR Lee, DJ Lee, Y Zhang, JJ Thompson, PP Rocha, ... bioRxiv, 2021 | | 2021 |
| Understanding the Role of a Zinc-Finger Protein, ZBTB24, in Shaping the Epigenome JJ Thompson College of Medicine-Mayo Clinic, 2018 | | 2018 |
