Highly flexible ligand docking: Benchmarking of the DockThor program on the LEADS-PEP protein–peptide data set KB Santos, IA Guedes, ALM Karl, LE Dardenne Journal of Chemical Information and Modeling 60 (2), 667-683, 2020 | 221 | 2020 |
Drug design and repurposing with DockThor-VS web server focusing on SARS-CoV-2 therapeutic targets and their non-synonym variants IA Guedes, LSC Costa, KB Dos Santos, ALM Karl, GK Rocha, IM Teixeira, ... Scientific Reports 11 (1), 5543, 2021 | 103 | 2021 |
Critical features of fragment libraries for protein structure prediction R Trevizani, FL Custódio, KB Dos Santos, LE Dardenne PloS one 12 (1), e0170131, 2017 | 28 | 2017 |
Profrager web server: Fragment libraries generation for protein structure prediction KB Santos, R Trevizani, FL Custódio, LE Dardenne Proceedings of the International Conference on Bioinformatics …, 2015 | 8 | 2015 |
Inserting co-evolution information from contact maps into a multiobjective genetic algorithm for protein structure prediction GK Rocha, KB Dos Santos, JS Angelo, FL Custodio, HJC Barbosa, ... 2018 IEEE Congress on Evolutionary Computation (CEC), 1-8, 2018 | 7 | 2018 |
Drug design and repurposing with DockThor-VS web server focusing on SARS-CoV-2 therapeutic targets and their non-synonym variants. Sci. Rep. 11 (1), 5543 IA Guedes, LSC Costa, KB Dos Santos, ALM Karl, GK Rocha, IM Teixeira, ... | 5 | 2021 |
Improving de novo protein structure prediction using contact maps information KB Santos, GK Rocha, FL Custódio, HJC Barbosa, LE Dardenne 2017 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2017 | 3 | 2017 |
Using an aggregation tree to arrange energy function terms for protein structure prediction GK Rocha, JS Angelo, KB Santos, FL Custódio, LE Dardenne, ... 2017 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2017 | 3 | 2017 |
Genetic operators based on backbone constraint angles for protein structure prediction KB Santos, FL Custódio, HJC Barbosa, LE Dardenne 2015 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2015 | 3 | 2015 |