How molecular size impacts RMSD applications in molecular dynamics simulations K Sargsyan, C Grauffel, C Lim Journal of chemical theory and computation 13 (4), 1518-1524, 2017 | 443 | 2017 |
Multi-targeting of functional cysteines in multiple conserved SARS-CoV-2 domains by clinically safe Zn-ejectors K Sargsyan, CC Lin, T Chen, C Grauffel, YP Chen, WZ Yang, HS Yuan, ... Chemical science 11 (36), 9904-9909, 2020 | 96 | 2020 |
Preferred hydrogen-bonding partners of cysteine: implications for regulating Cys functions K Mazmanian, K Sargsyan, C Grauffel, T Dudev, C Lim The Journal of Physical Chemistry B 120 (39), 10288-10296, 2016 | 78 | 2016 |
Synergistic inhibition of SARS-CoV-2 replication using disulfiram/ebselen and remdesivir T Chen, CY Fei, YP Chen, K Sargsyan, CP Chang, HS Yuan, C Lim ACS pharmacology & translational science 4 (2), 898-907, 2021 | 65 | 2021 |
How the local environment of functional sites regulates protein function K Mazmanian, K Sargsyan, C Lim Journal of the American Chemical Society 142 (22), 9861-9871, 2020 | 37 | 2020 |
Sequence-motif Detection of NAD(P)-binding Proteins: Discovery of a Unique Antibacterial Drug Target CL Yun Hao Hua, Chih Yuan Wu, Karen Sargsyan Scientific Reports 4, 2014 | 34 | 2014 |
Identifying RNA-binding residues based on evolutionary conserved structural and energetic features YC Chen, K Sargsyan, JD Wright, YS Huang, C Lim Nucleic acids research 42 (3), e15-e15, 2014 | 31 | 2014 |
GeoPCA: a new tool for multivariate analysis of dihedral angles based on principal component geodesics K Sargsyan, J Wright, C Lim Nucleic acids research 40 (3), e25-e25, 2011 | 29 | 2011 |
Partition function zeros of the one-dimensional Blume-Capel model in transfer matrix formalism RG Ghulghazaryan, KG Sargsyan, NS Ananikian Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 76 (2 …, 2007 | 24 | 2007 |
Linking distinct conformations of nicotinamide adenine dinucleotide with protein fold/function G Kuppuraj, K Sargsyan, YH Hua, AR Merrill, C Lim The Journal of Physical Chemistry B 115 (24), 7932-7939, 2011 | 23 | 2011 |
Arrangement of 3D structural motifs in ribosomal RNA K Sargsyan, C Lim Nucleic acids research 38 (11), 3512-3522, 2010 | 16 | 2010 |
A strategy for evaluating potential antiviral resistance to small molecule drugs and application to SARS-CoV-2 K Sargsyan, K Mazmanian, C Lim Scientific Reports 13 (1), 502, 2023 | 15 | 2023 |
Identifying COVID-19 Drug-Sites Susceptible To Clinically Safe Zn-ejector Drugs Using Evolutionary/Physical Principles K Sargsyan, T Chen, C Grauffel, C Lim https://doi.org/10.31219/osf.io/snuqf, 2020 | 15 | 2020 |
The partition function zeros for a Potts model of helix-coil transition with three-site interactions N Ananikian, L Ananikyan, R Artuso, K Sargsyan Physica A: Statistical Mechanics and its Applications 387 (22), 5433-5439, 2008 | 11 | 2008 |
Protein–protein docking using EMAP in CHARMM and support vector machine: Application to Ab/Ag complexes JD Wright, K Sargsyan, X Wu, BR Brooks, C Lim Journal of chemical theory and computation 9 (9), 4186-4194, 2013 | 9 | 2013 |
From quantum‐derived principles underlying cysteine reactivity to combating the COVID‐19 pandemic K Mazmanian, T Chen, K Sargsyan, C Lim Wiley Interdisciplinary Reviews: Computational Molecular Science 12 (5), e1607, 2022 | 8 | 2022 |
Factors Governing the Different Functions of Zn2+-Sites with Identical Ligands in Proteins YM Lee, C Grauffel, T Chen, K Sargsyan, C Lim Journal of Chemical Information and Modeling 59 (9), 3946-3954, 2019 | 8 | 2019 |
Correction: Multi-targeting of functional cysteines in multiple conserved SARS-CoV-2 domains by clinically safe Zn-ejectors K Sargsyan, CC Lin, T Chen, C Grauffel, YP Chen, WZ Yang, JJ Liang, ... Chemical Science 12 (17), 6210-6210, 2021 | 4 | 2021 |
Using protein language models for protein interaction hot spot prediction with limited data K Sargsyan, C Lim BMC bioinformatics 25 (1), 115, 2024 | 3 | 2024 |
Correction to “Synergistic Inhibition of SARS-CoV-2 Replication Using Disulfiram/Ebselen and Remdesivir” T Chen, CY Fei, YP Chen, K Sargsyan, JJ Liang, CC Liao, YL Lin, ... ACS Pharmacology & Translational Science 4 (3), 1246-1246, 2021 | 3 | 2021 |