Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic Y Turakhia, B Thornlow, AS Hinrichs, N De Maio, L Gozashti, R Lanfear, ... Nature genetics 53 (6), 809-816, 2021 | 302 | 2021 |
Issues with SARS-CoV-2 sequencing data L Gozashti, C Walker, N Goldman, R Corbett-Detig, N De Maio | 129* | 2020 |
Stability of SARS-CoV-2 phylogenies Y Turakhia, N De Maio, B Thornlow, L Gozashti, R Lanfear, CR Walker, ... PLoS genetics 16 (11), e1009175, 2020 | 103 | 2020 |
Shortcomings of SARS-CoV-2 genomic metadata L Gozashti, R Corbett-Detig BMC research notes 14 (1), 189, 2021 | 28 | 2021 |
Transposable elements drive intron gain in diverse eukaryotes L Gozashti, SW Roy, B Thornlow, A Kramer, M Ares Jr, R Corbett-Detig Proceedings of the National Academy of Sciences 119 (48), e2209766119, 2022 | 27 | 2022 |
Sex chromosome transformation and the origin of a male-specific X chromosome in the creeping vole MB Couger, SW Roy, N Anderson, L Gozashti, S Pirro, LS Millward, M Kim, ... Science 372 (6542), 592-600, 2021 | 22 | 2021 |
Intron-rich dinoflagellate genomes driven by Introner transposable elements of unprecedented diversity SW Roy, L Gozashti, BA Bowser, BN Weinstein, GE Larue, ... Current Biology 33 (1), 189-196. e4, 2023 | 11* | 2023 |
Transposable element interactions shape the ecology of the deer mouse genome L Gozashti, C Feschotte, HE Hoekstra Molecular Biology and Evolution 40 (4), msad069, 2023 | 10 | 2023 |
Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies L Gozashti, HE Hoekstra Genome Biology 25 (1), 4, 2024 | 2 | 2024 |
A phylogenetic approach to studying the roles of within-host evolution and between-host transmission of resistance for clinical Escherichia coli infections F van Nouhuijs, MGA Antony, F Orcales, L Gozashti, SW Roy, ... bioRxiv, 2022.12. 16.520823, 2022 | 2 | 2022 |
Evolutionary rates of testes-expressed genes differ between monogamous and promiscuous Peromyscus species L Gozashti, R Corbett-Detig, SW Roy bioRxiv, 2021.04. 21.440792, 2021 | 1 | 2021 |
Horizontal transmission of functionally diverse transposons is a major source of new introns L Gozashti, A Nakamoto, S Russell, R Corbett-Detig bioRxiv, 2024.06. 04.597373, 2024 | | 2024 |
How repeats rearrange chromosomes in deer mice L Gozashti, OS Harringmeyer, HE Hoekstra bioRxiv, 2024.05. 29.596518, 2024 | | 2024 |
Universal signatures of transposable element compartmentalization across eukaryotic genomes L Gozashti, DL Hartl, R Corbett-Detig bioRxiv, 2023 | | 2023 |
Transposable element competition shapes the deer mouse genome L Gozashti, C Feschotte, HE Hoekstra bioRxiv, 2022.10. 18.512801, 2022 | | 2022 |
Evolutionary rates of testes-expressed genes differ in monogamous and promiscuous Peromyscus species L Gozashti, R Corbett-Detig, SW Roy | | 2021 |
Introner Elements drive ongoing intron gain in Oikopleura dioica P Kaur, L Gozasthi | | 2020 |
Introner Elements Inhabit Algal and Protist Genomes L Gozashti | | |
De novo creation of spliceosomal introns by different transposition mechanisms across diverse eukaryotes L Gozashti | | |