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Lyla Atta
Lyla Atta
在 jhmi.edu 的电子邮件经过验证 - 首页
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Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma
T Hara, R Chanoch-Myers, ND Mathewson, C Myskiw, L Atta, L Bussema, ...
Cancer cell 39 (6), 779-792. e11, 2021
3362021
Reference-free cell type deconvolution of multi-cellular pixel-resolution spatially resolved transcriptomics data
BF Miller, F Huang, L Atta, A Sahoo, J Fan
Nature communications 13 (1), 2339, 2022
1142022
Computational challenges and opportunities in spatially resolved transcriptomic data analysis
L Atta, J Fan
Nature Communications 12 (1), 5283, 2021
482021
STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping
K Clifton, M Anant, G Aihara, L Atta, OK Aimiuwu, JM Kebschull, MI Miller, ...
Nature communications 14 (1), 8123, 2023
212023
A crisis-responsive framework for medical device development applied to the COVID-19 pandemic
MJ Antonini, D Plana, S Srinivasan, L Atta, A Achanta, H Yang, ...
Frontiers in digital health 3, 617106, 2021
172021
VeloViz: RNA velocity-informed embeddings for visualizing cellular trajectories
L Atta, A Sahoo, J Fan
Bioinformatics 38 (2), 391-396, 2022
152022
Systems modeling identifies divergent receptor tyrosine kinase reprogramming to MAPK pathway inhibition
AM Claas, L Atta, S Gordonov, AS Meyer, DA Lauffenburger
Cellular and molecular bioengineering 11, 451-469, 2018
112018
Considerations for the selection and use of disinfectants against SARS-CoV-2 in a health care setting
K Tyan, A Levin, A Avalos-Pacheco, D Plana, EA Rand, H Yang, ...
Open forum infectious diseases 7 (9), ofaa396, 2020
102020
Alignment of spatial transcriptomics data using diffeomorphic metric mapping
K Clifton, M Anant, G Aihara, L Atta, OK Aimiuwu, JM Kebschull, MI Miller, ...
bioRxiv, 2023
82023
De novo powered air-purifying respirator design and fabrication for pandemic response
A Kothakonda, L Atta, D Plana, F Ward, C Davis, A Cramer, R Moran, ...
Frontiers in bioengineering and biotechnology 9, 690905, 2021
72021
SEraster: a rasterization preprocessing framework for scalable spatial omics data analysis
G Aihara, K Clifton, M Chen, Z Li, L Atta, BF Miller, R Satija, JW Hickey, ...
Bioinformatics, btae412, 2024
42024
Soluble PD-L1 reprograms blood monocytes to prevent cerebral edema and facilitate recovery after ischemic stroke
JE Kim, RP Lee, E Yazigi, L Atta, J Feghali, A Pant, A Jain, I Levitan, ...
Brain, Behavior, and Immunity 116, 160-174, 2024
32024
Open Case Studies: Statistics and Data Science Education through Real-World Applications
C Wright, Q Meng, MR Breshock, L Atta, MA Taub, LR Jager, J Muschelli, ...
Journal of Statistics and Data Science Education, 1-30, 2024
22024
Gene count normalization in single-cell imaging-based spatially resolved transcriptomics
L Atta, K Clifton, M Anant, G Aihara, J Fan
Genome Biology 25 (1), 153, 2024
22024
Student curriculum review team, 8 years later: Where we stand and opportunities for growth
P Kumar, CM Pickering, L Atta, AG Burns, RF Chu, T Gracie, CX Qin, ...
Medical teacher 43 (3), 314-319, 2021
22021
Author Correction: Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)
S Jain, L Pei, JM Spraggins, M Angelo, JP Carson, N Gehlenborg, F Ginty, ...
Nature Cell Biology 26 (5), 839-839, 2024
12024
Characterizing cell-type spatial relationships across length scales in spatially resolved omics data
R dos Santos Peixoto, BF Miller, MA Brusko, L Atta, M Anant, MA Atkinson, ...
bioRxiv, 2023.10. 05.560733, 2023
12023
159 PD-1 Agonism as a Strategy to Prevent Neuroinflammation After Acute Large Vessel Occlusion
JE Kim, RP Lee, E Yazigi, J Feghali, L Atta, A Pant, I Levitan, R Xu, ...
Neurosurgery 70 (Supplement_1), 37, 2024
2024
IMMUNE CELLS INFLUENCE MESENCHYMAL-LIKE TRANSITION IN GLIOBLASTOMA
T Hara, R Chanoch-Myers, ND Mathewson, C Myskiw, L Atta, L Bussema
CANCER DISCOVERY 11 (8), 1869-1869, 2021
2021
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