| Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ... Nature 492 (7427), 59, 2012 | 426 | 2012 |
| Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans JM Archibald, MB Rogers, M Toop, K Ishida, PJ Keeling Proceedings of the National Academy of Sciences 100 (13), 7678-7683, 2003 | 304 | 2003 |
| Tracing the evolution of the light-harvesting antennae in chlorophyll a/b-containing organisms AG Koziol, T Borza, KI Ishida, P Keeling, RW Lee, DG Durnford Plant physiology 143 (4), 1802-1816, 2007 | 232 | 2007 |
| Phylogeny of novel naked filose and reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea revised D Bass, EEY Chao, S Nikolaev, A Yabuki, K Ishida, C Berney, U Pakzad, ... Protist 160 (1), 75-109, 2009 | 185 | 2009 |
| Second-and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a … K Ishida, BR Green Proceedings of the National Academy of Sciences 99 (14), 9294-9299, 2002 | 184 | 2002 |
| Phylogenomics places orphan protistan lineages in a novel eukaryotic super-group MW Brown, AA Heiss, R Kamikawa, Y Inagaki, A Yabuki, AK Tice, ... Genome biology and evolution 10 (2), 427-433, 2018 | 137 | 2018 |
| Differential gene retention in plastids of common recent origin A Reyes-Prieto, HS Yoon, A Moustafa, EC Yang, RA Andersen, SM Boo, ... Molecular biology and evolution 27 (7), 1530-1537, 2010 | 115 | 2010 |
| Global searches for microalgae and aquatic plants that can eliminate radioactive cesium, iodine and strontium from the radio-polluted aquatic environment: a bioremediation strategy S Fukuda, K Iwamoto, M Atsumi, A Yokoyama, T Nakayama, K Ishida, ... Journal of plant research 127 (1), 79-89, 2014 | 113 | 2014 |
| Another acquisition of a primary photosynthetic organelle is underway in Paulinella chromatophora T Nakayama, K Ishida Current Biology 19 (7), R284-R285, 2009 | 103 | 2009 |
| Diversification of a chimaeric algal group, the chlorarachniophytes: phylogeny of nuclear and nucleomorph small-subunit rRNA genes K Ishida, BR Green, T Cavalier-Smith Molecular Biology and Evolution 16 (3), 321-321, 1999 | 94 | 1999 |
| The origin of chlorarachniophyte plastids, as inferred from phylogenetic comparisons of amino acid sequences of EF-Tu K Ishida, Y Cao, M Hasegawa, N Okada, Y Hara Journal of molecular evolution 45 (6), 682-687, 1997 | 91 | 1997 |
| A single origin of the photosynthetic organelle in different Paulinella lineages HS Yoon, T Nakayama, A Reyes-Prieto, RA Andersen, SM Boo, K Ishida, ... BMC evolutionary biology 9 (1), 98, 2009 | 86 | 2009 |
| Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista A Yabuki, R Kamikawa, SA Ishikawa, M Kolisko, E Kim, AS Tanabe, ... Scientific reports 4, 4641, 2014 | 78 | 2014 |
| Palpitomonas bilix gen. et sp. nov.: a novel deep-branching heterotroph possibly related to Archaeplastida or Hacrobia A Yabuki, Y Inagaki, K Ishida Protist 161 (4), 523-538, 2010 | 63 | 2010 |
| Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory Y Kashiyama, A Yokoyama, Y Kinoshita, S Shoji, H Miyashiya, T Shiratori, ... Proceedings of the National Academy of Sciences 109 (43), 17328-17335, 2012 | 62 | 2012 |
| Molecular genetic and chemotaxonomic characterization of the terrestrial cyanobacterium Nostoc commune and its neighboring species H Arima, N Horiguchi, S Takaichi, R Kofuji, KI Ishida, K Wada, T Sakamoto FEMS microbiology ecology 79 (1), 34-45, 2012 | 62 | 2012 |
| A non-photosynthetic diatom reveals early steps of reductive evolution in plastids R Kamikawa, D Moog, S Zauner, G Tanifuji, KI Ishida, H Miyashita, ... Molecular biology and evolution 34 (9), 2355-2366, 2017 | 61 | 2017 |
| Endomembrane structure and the chloroplast protein targeting pathway in Heterosigma akashiwo (Raphidophyceae, Chromista) K Ishida, T Cavalier‐Smith, BR Green Journal of Phycology 36 (6), 1135-1144, 2000 | 61 | 2000 |
| Phylogeny of nuclear-encoded plastid-targeted GAPDH gene supports separate origins for the peridinin-and the fucoxanthin derivative-containing plastids of dinoflagellates K Takishita, K Ishida, T Maruyama Protist 155 (4), 447-458, 2004 | 59 | 2004 |
| An enigmatic GAPDH gene in the symbiotic dinoflagellate genus Symbiodinium and its related species (the order Suessiales): possible lateral gene transfer between two eukaryotic … K Takishita, K Ishida, T Maruyama Protist 154 (3-4), 443-454, 2003 | 54 | 2003 |
