ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years R Nikam, A Kulandaisamy, K Harini, D Sharma, MM Gromiha Nucleic acids research 49 (D1), D420-D424, 2021 | 160 | 2021 |
A novel hybrid SEIQR model incorporating the effect of quarantine and lockdown regulations for COVID-19 R Prabakaran, S Jemimah, P Rawat, D Sharma, MM Gromiha Scientific reports 11 (1), 24073, 2021 | 21 | 2021 |
In silico evaluation of the impact of Omicron variant of concern sublineage BA. 4 and BA. 5 on the sensitivity of RT‐qPCR assays for SARS‐CoV‐2 detection using whole genome … D Sharma, KI Notarte, RA Fernandez, G Lippi, MM Gromiha, BM Henry Journal of Medical Virology 95 (1), e28241, 2023 | 20 | 2023 |
Elucidating important structural features for the binding affinity of spike‐SARS‐CoV‐2 neutralizing antibody complexes D Sharma, P Rawat, V Janakiraman, MM Gromiha Proteins: Structure, Function, and Bioinformatics 90 (3), 824-834, 2022 | 17 | 2022 |
Exploring antibody repurposing for COVID-19: beyond presumed roles of therapeutic antibodies P Rawat, D Sharma, A Srivastava, V Janakiraman, MM Gromiha Scientific reports 11 (1), 10220, 2021 | 14 | 2021 |
In silico evaluation of the impact of the Omicron variant on the sensitivity of RT-qPCR assays for SARS-CoV-2 detection using whole genome sequencing D Sharma, C Ye, G Lippi, JB Torrelles, L Martinez-Sobrido, MM Gromiha, ... | 9 | 2022 |
Understanding the mutational frequency in SARS-CoV-2 proteome using structural features P Rawat, D Sharma, M Pandey, R Prabakaran, MM Gromiha Computers in biology and medicine 147, 105708, 2022 | 6 | 2022 |
Predicting the immune escape of SARS-CoV-2 neutralizing antibodies upon mutation D Sharma, P Rawat, V Greiff, V Janakiraman, MM Gromiha Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1870 (2), 166959, 2024 | 4 | 2024 |
Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies P Rawat, D Sharma, R Prabakaran, F Ridha, M Mohkhedkar, ... Bioinformatics 38 (16), 4051-4052, 2022 | 3 | 2022 |
Literature mining discerns latent disease–gene relationships P Rai, A Jain, S Kumar, D Sharma, N Jha, S Chawla, A Raj, A Gupta, ... Bioinformatics 40 (4), btae185, 2024 | 2 | 2024 |
CoDe: a web-based tool for codon deoptimization D Sharma, T Baas, A Nogales, L Martinez-Sobrido, MM Gromiha Bioinformatics Advances 3 (1), vbac102, 2023 | 1 | 2023 |
rAbDesFlow: a novel workflow for computational recombinant antibody design for healthcare engineering SR Krishnan, D Sharma, Y Nazeer, M Bose, T Rajkumar, G Jayaraman, ... Antibody Therapeutics 7 (3), 256-265, 2024 | | 2024 |
Illustrative Tutorials for ProThermDB: Thermodynamic Database for Proteins and Mutants A Kulandaisamy, R Nikam, K Harini, D Sharma, MM Gromiha Current Protocols 1 (11), e306, 2021 | | 2021 |