Direct observation of transition paths during the folding of proteins and nucleic acids K Neupane, DAN Foster, DR Dee, H Yu, F Wang, MT Woodside Science 352 (3), 239-242, 2016 | 240 | 2016 |
Structural and functional conservation of the programmed− 1 ribosomal frameshift signal of SARS coronavirus 2 (SARS-CoV-2) JA Kelly, AN Olson, K Neupane, S Munshi, J San Emeterio, L Pollack, ... Journal of Biological Chemistry 295 (31), 10741-10748, 2020 | 211 | 2020 |
Experimental validation of free-energy-landscape reconstruction from non-equilibrium single-molecule force spectroscopy measurements AN Gupta, A Vincent, K Neupane, H Yu, F Wang, MT Woodside Nature Physics 7 (8), 631-634, 2011 | 191 | 2011 |
Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and rates MTW Hao Yu, Amar Nath Gupta, Xia Liu, Krishna Neupane Proceedings of National Academy of Sciences, USA, 2012 | 181 | 2012 |
Elasticity, viscosity, and orientational fluctuations of a lyotropic chromonic nematic liquid crystal disodium cromoglycate S Zhou, YA Neupane, Krishna, Nastishin, AR Baldwon, SV Shianyovskii, ... Soft Matter, 51-75, 2014 | 169 | 2014 |
Direct observation of multiple misfolding pathways in a single prion protein molecule H Yu, X Liu, K Neupane, AN Gupta, AM Brigley, A Solanki, I Sosova, ... Proceedings of the National Academy of Sciences 109 (14), 5283-5288, 2012 | 163 | 2012 |
Single-molecule force spectroscopy of the add adenine riboswitch relates folding to regulatory mechanism K Neupane, H Yu, DAN Foster, F Wang, MT Woodside Nucleic acids research 39 (17), 7677-7687, 2011 | 135 | 2011 |
Transition Path Times for Nucleic Acid Folding Determined from Energy-Landscape Analysis<? format?> of Single-Molecule Trajectories K Neupane, DB Ritchie, H Yu, DAN Foster, F Wang, MT Woodside Physical review letters 109 (6), 068102, 2012 | 133 | 2012 |
Protein folding trajectories can be described quantitatively by one-dimensional diffusion over measured energy landscapes K Neupane, AP Manuel, MT Woodside Nature Physics 12 (7), 700-703, 2016 | 116 | 2016 |
Dynamic light scattering study of biaxial ordering in a thermotropic liquid crystal K Neupane, SW Kang, S Sharma, D Carney, T Meyer, GH Mehl, ... Physical review letters 97 (20), 207802, 2006 | 94 | 2006 |
Critical behavior at the isotropic-to-nematic phase transition in a bent-core liquid crystal D Wiant, S Stojadinovic, K Neupane, S Sharma, K Fodor-Csorba, A Jakli, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 73 (3 …, 2006 | 81 | 2006 |
Diverse metastable structures formed by small oligomers of α-synuclein probed by force spectroscopy K Neupane, A Solanki, I Sosova, M Belov, MT Woodside PloS one 9 (1), e86495, 2014 | 66 | 2014 |
Direct measurement of sequence-dependent transition path times and conformational diffusion in DNA duplex formation K Neupane, F Wang, M Woodside Proceeding of National Academy of Sciences USA 114 (6), 1329-1334, 2017 | 60 | 2017 |
Transition-path probability as a test of reaction-coordinate quality reveals DNA hairpin folding is a one-dimensional diffusive process K Neupane, AP Manuel, J Lambert, MT Woodside The journal of physical chemistry letters 6 (6), 1005-1010, 2015 | 56 | 2015 |
Structural dynamics of single SARS-CoV-2 pseudoknot molecules reveal topologically distinct conformers K Neupane, M Zhao, A Lyons, S Munshi, SM Ileperuma, DB Ritchie, ... Nature Communications 12 (1), 4749, 2021 | 53* | 2021 |
Measuring the local velocity along transition paths during the folding of single biological molecules K Neupane, NQ Hoffer, MT Woodside Physical review letters 121 (1), 018102, 2018 | 51 | 2018 |
Anti-frameshifting ligand active against SARS coronavirus-2 is resistant to natural mutations of the frameshift-stimulatory pseudoknot K Neupane, S Munshi, M Zhao, DB Ritchie, SM Ileperuma, MT Woodside Journal of molecular biology 432 (21), 5843-5847, 2020 | 50 | 2020 |
Complex dynamics under tension in a high-efficiency frameshift stimulatory structure MTJ Halma, DB Ritchie, TR Cappellano, K Neupane, MT Woodside Proceedings of the National Academy of Sciences 116 (39), 19500-19505, 2019 | 50 | 2019 |
Single-Molecule Force Spectroscopy of Rapidly Fluctuating, Marginally Stable Structures in the Intrinsically Disordered Protein -Synuclein A Solanki, K Neupane, MT Woodside Physical review letters 112 (15), 158103, 2014 | 50 | 2014 |
Pharmacological chaperone reshapes the energy landscape for folding and aggregation of the prion protein AN Gupta, K Neupane, N Rezajooei, LM Cortez, VL Sim, MT Woodside Nature Communications 7 (1), 12058, 2016 | 49 | 2016 |