| The evolution of gene expression levels in mammalian organs D Brawand, M Soumillon, A Necsulea, P Julien, G Csárdi, P Harrigan, ... Nature 478 (7369), 343-348, 2011 | 1296 | 2011 |
| The evolution of lncRNA repertoires and expression patterns in tetrapods A Necsulea, M Soumillon, M Warnefors, A Liechti, T Daish, U Zeller, ... Nature 505 (7485), 635-640, 2014 | 1056 | 2014 |
| Cellular source and mechanisms of high transcriptome complexity in the mammalian testis M Soumillon, A Necsulea, M Weier, D Brawand, X Zhang, H Gu, P Barthes, ... Cell reports 3 (6), 2179-2190, 2013 | 563 | 2013 |
| Cervicovaginal bacteria are a major modulator of host inflammatory responses in the female genital tract EH Byrne, KE Doherty, BA Bowman, HS Yamamoto, M Soumillon, ... Immunity 42 (5), 965-976, 2015 | 506 | 2015 |
| Birth and expression evolution of mammalian microRNA genes J Meunier, F Lemoine, M Soumillon, A Liechti, M Weier, K Guschanski, ... Genome research 23 (1), 34-45, 2013 | 322 | 2013 |
| Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency D Cacchiarelli, C Trapnell, MJ Ziller, M Soumillon, M Cesana, R Karnik, ... Cell 162 (2), 412-424, 2015 | 243 | 2015 |
| Characterization of directed differentiation by high-throughput single-cell RNA-Seq M Soumillon, D Cacchiarelli, S Semrau, A van Oudenaarden, ... BioRxiv, 003236, 2014 | 226 | 2014 |
| Mechanisms and evolutionary patterns of mammalian and avian dosage compensation P Julien, D Brawand, M Soumillon, A Necsulea, A Liechti, F Schütz, ... PLoS biology 10 (5), e1001328, 2012 | 215 | 2012 |
| A targeted functional RNA interference screen uncovers glypican 5 as an entry factor for hepatitis B and D viruses ER Verrier, CC Colpitts, C Bach, L Heydmann, A Weiss, M Renaud, ... Hepatology 63 (1), 35-48, 2016 | 199 | 2016 |
| Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells S Semrau, JE Goldmann, M Soumillon, TS Mikkelsen, R Jaenisch, ... Nature communications 8 (1), 1096, 2017 | 193 | 2017 |
| High-throughput rna-seq T Mikkelsen, M Soumillon US Patent App. 14/898,030, 2016 | 190 | 2016 |
| Integrated pseudotime analysis of human pre-implantation embryo single-cell transcriptomes reveals the dynamics of lineage specification D Meistermann, A Bruneau, S Loubersac, A Reignier, J Firmin, ... Cell Stem Cell 28 (9), 1625-1640. e6, 2021 | 143 | 2021 |
| Parallel derivation of isogenic human primed and naive induced pluripotent stem cells S Kilens, D Meistermann, D Moreno, C Chariau, A Gaignerie, A Reignier, ... Nature communications 9 (1), 360, 2018 | 139 | 2018 |
| Organism-level analysis of vaccination reveals networks of protection across tissues M Kadoki, A Patil, CC Thaiss, DJ Brooks, S Pandey, D Deep, D Alvarez, ... Cell 171 (2), 398-413. e21, 2017 | 80 | 2017 |
| The leak channel NALCN controls tonic firing and glycolytic sensitivity of substantia nigra pars reticulata neurons A Lutas, C Lahmann, M Soumillon, G Yellen Elife 5, e15271, 2016 | 70 | 2016 |
| A comparison of mRNA sequencing with random primed and 3′-directed libraries Y Xiong, M Soumillon, J Wu, J Hansen, B Hu, JG Van Hasselt, ... Scientific reports 7 (1), 14626, 2017 | 64 | 2017 |
| Light-activated cell identification and sorting (LACIS) for selection of edited clones on a nanofluidic device A Mocciaro, TL Roth, HM Bennett, M Soumillon, A Shah, J Hiatt, ... Communications Biology 1 (1), 41, 2018 | 47 | 2018 |
| Methods, systems and devices for selection and generation of genome edited clones GG Lavieu, A Mocciaro, XG Radstrom, JM McEwen, M Soumillon, ... US Patent 10,239,058, 2019 | 22 | 2019 |
| Dna barcode compositions and methods of in situ identification in a microfluidic device M Soumillon, HM Bennett, YXM GONZALES, RK RAMENANI | 16 | 2022 |
| Biological Process Systems and Methods Using Microfluidic Apparatus Having an Optimized Electrowetting Surface JM McEwen, M Soumillon, SN Pei, RD Lowe, SA Nedungadi, VLS Kurz, ... US Patent App. 16/661,310, 2020 | 14 | 2020 |
