Unraveling the hidden universe of small proteins in bacterial genomes S Miravet-Verde, et al. Mol Syst Biol 15, e8290, 2019 | 116 | 2019 |
High frequencies of antibiotic resistance genes in infants’ meconium and early fecal samples MJ Gosalbes, Y Vallès, N Jiménez-Hernández, C Balle, P Riva, ... Journal of developmental origins of health and disease 7 (1), 35-44, 2016 | 95 | 2016 |
The role of clonal communication and heterogeneity in breast cancer A Martín-Pardillos, Á Valls Chiva, G Bande Vargas, P Hurtado Blanco, ... BMC cancer 19, 1-26, 2019 | 50 | 2019 |
SynMyco transposon: engineering transposon vectors for efficient transformation of minimal genomes A Montero-Blay, S Miravet-Verde, M Lluch-Senar, C Piñero-Lambea, ... DNA Research 26 (4), 327-339, 2019 | 24 | 2019 |
Specialization of the photoreceptor transcriptome by Srrm3-dependent microexons is required for outer segment maintenance and vision L Ciampi, F Mantica, L López-Blanch, J Permanyer, C Rodriguez-Marín, ... Proceedings of the National Academy of Sciences 119 (29), e2117090119, 2022 | 23 | 2022 |
FASTQINS and ANUBIS: two bioinformatic tools to explore facts and artifacts in transposon sequencing and essentiality studies S Miravet-Verde, R Burgos, J Delgado, M Lluch-Senar, L Serrano Nucleic Acids Research, 2020 | 20 | 2020 |
Alternative transcriptional regulation in genome-reduced bacteria S Miravet-Verde, V Lloréns-Rico, L Serrano Current opinion in microbiology 39, 89-95, 2017 | 17 | 2017 |
Inferring active metabolic pathways from proteomics and essentiality data A Montero-Blay, C Piñero-Lambea, S Miravet-Verde, M Lluch-Senar, ... Cell Reports 31 (9), 2020 | 15 | 2020 |
A genetic toolkit and gene switches to limit Mycoplasma growth for biosafety applications A Broto, E Gaspari, S Miravet-Verde, VAPM Dos Santos, M Isalan Nature Communications 13 (1), 1910, 2022 | 12 | 2022 |
LoxTnSeq: random transposon insertions combined with cre/lox recombination and counterselection to generate large random genome reductions D Shaw, S Miravet‐Verde, C Piñero‐Lambea, L Serrano, M Lluch‐Senar Microbial Biotechnology 14 (6), 2403-2419, 2021 | 12 | 2021 |
SURE editing: combining oligo-recombineering and programmable insertion/deletion of selection markers to efficiently edit the Mycoplasma pneumoniae genome C Pinero-Lambea, E Garcia-Ramallo, S Miravet-Verde, R Burgos, ... Nucleic Acids Research 50 (22), e127-e127, 2022 | 9 | 2022 |
Engineering Bacteria to Form a Biofilm and Induce Clumping in Caenorhabditis elegans P Dorado-Morales, A Iglesias, G Zafrilla, A Valero, A Torres, ... ACS Synthetic Biology 3 (12), 941-943, 2014 | 4 | 2014 |
ProTInSeq: transposon insertion tracking by ultra-deep DNA sequencing to identify translated large and small ORFs S Miravet-Verde, R Mazzolini, C Segura-Morales, A Broto, M Lluch-Senar, ... nature communications 15 (1), 2091, 2024 | 3 | 2024 |
The mOTUs online database provides web-accessible genomic context to taxonomic profiling of microbial communities M Dmitrijeva, HJ Ruscheweyh, L Feer, K Li, S Miravet-Verde, A Sintsova, ... Nucleic Acids Research, gkae1004, 2024 | | 2024 |
Extensive data mining uncovers novel diversity among members of the rare biosphere within the Thermoplasmatota MD Maeke, X Yin, LC Wunder, C Vanni, T Richter-Heitmann, ... | | 2024 |
In silico RNA isoform screening to identify potential cancer driver exons with therapeutic applications M Anglada-Girotto, L Ciampi, S Bonnal, SA Head, S Miravet-Verde, ... Nature Communications 15 (1), 7039, 2024 | | 2024 |
Engineering Mycoplasma pneumoniae to bypass the association with Guillain-Barré syndrome A Broto, C Piñero-Lambea, C Segura-Morales, AP Tio-Gillen, WWJ Unger, ... Microbes and infection, 105342, 2024 | | 2024 |
Genome-resolved diversity and biosynthetic potential of the coral reef microbiome L Paoli, F Wiederkehr, HJ Ruscheweyh, S Miravet-Verde, KSI Bistolas, ... bioRxiv, 2024.08. 18.608444, 2024 | | 2024 |
Disentangling the splicing factor programs underlying complex molecular phenotypes M Anglada-Girotto, DF Moakley, C Zhang, S Miravet-Verde, A Califano, ... bioRxiv, 2024.06. 21.600051, 2024 | | 2024 |
robustica: customizable robust independent component analysis M Anglada-Girotto, S Miravet-Verde, L Serrano, SA Head BMC bioinformatics 23 (1), 519, 2022 | | 2022 |