The structure, function and evolution of a complete human chromosome 8 GA Logsdon, MR Vollger, PH Hsieh, Y Mao, MA Liskovykh, S Koren, ... Nature 593 (7857), 101-107, 2021 | 276 | 2021 |
Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes J Ebler, P Ebert, WE Clarke, T Rausch, PA Audano, T Houwaart, Y Mao, ... Nature genetics 54 (4), 518-525, 2022 | 119 | 2022 |
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility WC Warren, RA Harris, M Haukness, IT Fiddes, SC Murali, J Fernandes, ... Science 370 (6523), eabc6617, 2020 | 117 | 2020 |
The roles of introgression and climate change in the rise to dominance of Acropora corals Y Mao, EP Economo, N Satoh Current Biology 28 (21), 3373-3382. e5, 2018 | 76 | 2018 |
A high-quality bonobo genome refines the analysis of hominid evolution Y Mao, CR Catacchio, LDW Hillier, D Porubsky, R Li, A Sulovari, ... Nature 594 (7861), 77-81, 2021 | 57 | 2021 |
Integrated gene analyses of de novo variants from 46,612 trios with autism and developmental disorders T Wang, CN Kim, TE Bakken, MA Gillentine, B Henning, Y Mao, ... Proceedings of the National Academy of Sciences 119 (46), e2203491119, 2022 | 34* | 2022 |
A complete, telomere-to-telomere human genome sequence presents new opportunities for evolutionary genomics Y Mao, G Zhang Nature methods 19 (6), 635-638, 2022 | 30 | 2022 |
An evolutionary driver of interspersed segmental duplications in primates S Cantsilieris, SM Sunkin, ME Johnson, F Anaclerio, J Huddleston, ... Genome biology 21, 1-35, 2020 | 24 | 2020 |
The complete and fully-phased diploid genome of a male Han Chinese C Yang, Y Zhou, Y Song, D Wu, Y Zeng, L Nie, P Liu, S Zhang, G Chen, ... Cell Research 33 (10), 745-761, 2023 | 22 | 2023 |
Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution FAM Maggiolini, AD Sanders, CJ Shew, A Sulovari, Y Mao, M Puig, ... Genome research 30 (11), 1680-1693, 2020 | 22 | 2020 |
The variation and evolution of complete human centromeres GA Logsdon, AN Rozanski, F Ryabov, T Potapova, VA Shepelev, ... Nature 629 (8010), 136-145, 2024 | 20 | 2024 |
Evidence for opposing selective forces operating on human-specific duplicated TCAF genes in Neanderthals and humans PH Hsieh, V Dang, MR Vollger, Y Mao, TH Huang, PC Dishuck, C Baker, ... Nature communications 12 (1), 5118, 2021 | 19 | 2021 |
Structurally divergent and recurrently mutated regions of primate genomes Y Mao, WT Harvey, D Porubsky, KM Munson, K Hoekzema, AP Lewis, ... Cell 187 (6), 1547-1562. e13, 2024 | 18 | 2024 |
Non-random arrangement of synonymous codons in archaea coding sequences YM Zhang, ZQ Shao, LT Yang, XQ Sun, YF Mao, JQ Chen, B Wang Genomics 101 (6), 362-367, 2013 | 17 | 2013 |
TREEasy: An automated workflow to infer gene trees, species trees, and phylogenetic networks from multilocus data Y Mao, S Hou, J Shi, EP Economo Molecular ecology resources 20 (3), 832-840, 2020 | 16 | 2020 |
A likely ancient genome duplication in the speciose reef-building coral genus, Acropora Y Mao, N Satoh Iscience 13, 20-32, 2019 | 15 | 2019 |
Genomic insights into hybridization of reef corals Y Mao Coral Reefs 39 (1), 61-67, 2020 | 14 | 2020 |
TAD evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function M Okhovat, J VanCampen, KA Nevonen, L Harshman, W Li, CE Layman, ... Nature communications 14 (1), 8111, 2023 | 11 | 2023 |
GenoDup Pipeline: a tool to detect genome duplication using the dS-based method Y Mao PeerJ 7, e6303, 2019 | 11 | 2019 |
Characterization of large-scale genomic differences in the first complete human genome X Yang, X Wang, Y Zou, S Zhang, M Xia, L Fu, MR Vollger, NC Chen, ... Genome biology 24 (1), 157, 2023 | 9* | 2023 |