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Martin Hölzer
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Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis
A Viehweger, S Krautwurst, K Lamkiewicz, R Madhugiri, J Ziebuhr, ...
Genome research 29 (9), 1545-1554, 2019
2342019
De novo transcriptome assembly: A comprehensive cross-species comparison of short-read RNA-Seq assemblers
M Hölzer, M Marz
GigaScience 8 (5), giz039, 2019
208*2019
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research
F Hufsky, K Lamkiewicz, A Almeida, A Aouacheria, C Arighi, A Bateman, ...
Briefings in bioinformatics 22 (2), 642-663, 2021
1452021
Integrating cultivation and metagenomics for a multi-kingdom view of skin microbiome diversity and functions
S Saheb Kashaf, DM Proctor, C Deming, P Saary, M Hölzer, ME Taylor, ...
Nature microbiology 7 (1), 169-179, 2022
882022
Chlamydia buteonis, a new Chlamydia species isolated from a red-shouldered hawk
K Laroucau, F Vorimore, R Aaziz, L Solmonson, RC Hsia, PM Bavoil, ...
Systematic and applied microbiology 42 (5), 125997, 2019
702019
Cohesin-mediated NF-κB signaling limits hematopoietic stem cell self-renewal in aging and inflammation
Z Chen, EM Amro, F Becker, M Hölzer, SMM Rasa, SN Njeru, B Han, ...
Journal of Experimental Medicine 216 (1), 152-175, 2019
682019
Evolution and antiviral specificity of interferon-induced Mx proteins of bats against Ebola-, Influenza-, and other RNA viruses.
J Fuchs, M Hölzer, A Schilling, Mirjam: Patzina, Corinna: Schoen, ...
Journal of Virology, 2017
662017
EpiDope: A Deep neural network for linear B-cell epitope prediction
M Collatz, F Mock, E Barth, M Hölzer, K Sachse, M Marz
Bioinformatics 37 (4), 448-455, 2021
652021
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells
M Hölzer, V Krähling, F Amman, E Barth, SH Bernhart, VAO Carmelo, ...
Scientific reports 6 (1), 34589, 2016
642016
Inclusion of Oxford Nanopore long reads improves all microbial and viral metagenome‐assembled genomes from a complex aquifer system
WA Overholt, M Hölzer, P Geesink, C Diezel, M Marz, K Küsel
Environmental Microbiology 22 (9), 4000-4013, 2020
582020
The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers
NM Chaudhari, WA Overholt, PA Figueroa-Gonzalez, M Taubert, ...
Environmental microbiome 16, 1-18, 2021
452021
Massive effect on lncRNAs in human monocytes during fungal and bacterial infections and in response to vitamins A and D
K Riege, M Hölzer, TE Klassert, E Barth, J Bräuer, M Collatz, F Hufsky, ...
Scientific reports 7, 40598, 2017
372017
poreCov-an easy to use, fast, and robust workflow for SARS-CoV-2 genome reconstruction via nanopore sequencing
C Brandt, S Krautwurst, R Spott, M Lohde, M Jundzill, M Marquet, ...
Frontiers in Genetics, 1397, 2021
342021
Carbon fixation rates in groundwater similar to those in oligotrophic marine systems
WA Overholt, S Trumbore, X Xu, TLV Bornemann, AJ Probst, M Krüger, ...
Nature Geoscience 15 (7), 561-567, 2022
332022
Evaluation of Sequencing Library Preparation Protocols for Viral Metagenomic Analysis from Pristine Aquifer Groundwaters
R Kallies, M Hölzer, R Brizola Toscan, U Nunes da Rocha, J Anders, ...
Viruses 11 (6), 484, 2019
322019
Evidence for the existence of a new genus Chlamydiifrater gen. nov. inside the family Chlamydiaceae with two new species isolated from flamingo (Phoenicopterus roseus …
F Vorimore, M Hölzer, EM Liebler-Tenorio, LM Barf, S Delannoy, ...
Systematic and applied microbiology 44 (4), 126200, 2021
302021
Virus-and Interferon Alpha-Induced Transcriptomes of Cells from the Microbat Myotis daubentonii
M Hölzer, A Schoen, J Wulle, MA Müller, C Drosten, M Marz, F Weber
iScience 19, 647-661, 2019
302019
Comparative Genome Analysis of 33 Chlamydia Strains Reveals Characteristic Features of Chlamydia Psittaci and Closely Related Species
M Hölzer, LM Barf, K Lamkiewicz, F Vorimore, M Lataretu, A Favaroni, ...
Pathogens 9 (11), 899, 2020
282020
Software Dedicated to Virus Sequence Analysis "Bioinformatics Goes Viral"
M Hölzer, M Marz
Advances in Virus Research 99, 233-257, 2017
282017
Antibody escape and global spread of SARS-CoV-2 lineage A. 27
T Kaleta, L Kern, SL Hong, M Hölzer, G Kochs, J Beer, D Schnepf, ...
Nature communications 13 (1), 1152, 2022
272022
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