Drug repositioning: a machine-learning approach through data integration F Napolitano, Y Zhao, VM Moreira, R Tagliaferri, J Kere, M D’Amato, ... Journal of cheminformatics 5, 1-9, 2013 | 355 | 2013 |
Goblet cell hyperplasia requires high bicarbonate transport to support mucin release G Gorrieri, P Scudieri, E Caci, M Schiavon, V Tomati, F Sirci, F Napolitano, ... Scientific reports 6 (1), 36016, 2016 | 95 | 2016 |
Computer-aided drug repurposing for cancer therapy: approaches and opportunities to challenge anticancer targets C Mottini, F Napolitano, Z Li, X Gao, L Cardone Seminars in cancer biology 68, 59-74, 2021 | 93 | 2021 |
Mantra 2.0: an online collaborative resource for drug mode of action and repurposing by network analysis D Carrella, F Napolitano, R Rispoli, M Miglietta, A Carissimo, L Cutillo, ... Bioinformatics 30 (12), 1787-1788, 2014 | 85 | 2014 |
Drug-set enrichment analysis: a novel tool to investigate drug mode of action F Napolitano, F Sirci, D Carrella, D di Bernardo Bioinformatics 32 (2), 235-241, 2016 | 81 | 2016 |
gene2drug: a computational tool for pathway-based rational drug repositioning F Napolitano, D Carrella, B Mandriani, S Pisonero-Vaquero, F Sirci, ... Bioinformatics 34 (9), 1498-1505, 2018 | 71 | 2018 |
Data mining in cancer research [application notes] PJG Lisboa, A Vellido, R Tagliaferri, F Napolitano, M Ceccarelli, ... IEEE computational intelligence magazine 5 (1), 14-18, 2010 | 62 | 2010 |
Fat induces glucose metabolism in nontransformed liver cells and promotes liver tumorigenesis LA Broadfield, JAG Duarte, R Schmieder, D Broekaert, K Veys, M Planque, ... Cancer research 81 (8), 1988-2001, 2021 | 55 | 2021 |
Integrative genetic, epigenetic and pathological analysis of paraganglioma reveals complex dysregulation of NOTCH signaling A Cama, F Verginelli, LV Lotti, F Napolitano, A Morgano, A D’Orazio, ... Acta Neuropathologica 126, 575-594, 2013 | 34 | 2013 |
Interactive data analysis and clustering of genomic data A Ciaramella, S Cocozza, F Iorio, G Miele, F Napolitano, M Pinelli, ... Neural Networks 21 (2-3), 368-378, 2008 | 34 | 2008 |
MetaCancer: a deep learning-based pan-cancer metastasis prediction model developed using multi-omics data S Albaradei, F Napolitano, MA Thafar, T Gojobori, M Essack, X Gao Computational and Structural Biotechnology Journal 19, 4404-4411, 2021 | 30 | 2021 |
Clustering and visualization approaches for human cell cycle gene expression data analysis F Napolitano, G Raiconi, R Tagliaferri, A Ciaramella, A Staiano, G Miele International Journal of Approximate Reasoning 47 (1), 70-84, 2008 | 30 | 2008 |
Impact of computational approaches in the fight against COVID-19: an AI guided review of 17 000 studies F Napolitano, X Xu, X Gao Briefings in bioinformatics 23 (1), bbab456, 2022 | 29 | 2022 |
Comparing structural and transcriptional drug networks reveals signatures of drug activity and toxicity in transcriptional responses F Sirci, F Napolitano, S Pisonero-Vaquero, D Carrella, DL Medina, ... NPJ systems biology and applications 3 (1), 23, 2017 | 26 | 2017 |
In silico modeling of liver metabolism in a human disease reveals a key enzyme for histidine and histamine homeostasis R Pagliarini, R Castello, F Napolitano, R Borzone, P Annunziata, ... Cell reports 15 (10), 2292-2300, 2016 | 26 | 2016 |
The Creative Psychosocial and Cultural Genomic Healing Experience: A new top-down epigenomic psychotherapeutic protocol M Cozzolino, R Tagliaferri, S Castiglione, V Fortino, A Cicatelli, F Guarino, ... The International Journal of Psychosocial Genomics: Consciousness and Health …, 2014 | 22 | 2014 |
Transcriptomic analysis identifies organ-specific metastasis genes and pathways across different primary sites L Zhang, M Fan, F Napolitano, X Gao, Y Xu, L Li Journal of Translational Medicine 19, 1-11, 2021 | 21 | 2021 |
Evaluation of a systems biology approach to identify pharmacological correctors of the mutant CFTR chloride channel E Pesce, G Gorrieri, F Sirci, F Napolitano, D Carrella, E Caci, V Tomati, ... Journal of Cystic Fibrosis 15 (4), 425-435, 2016 | 19 | 2016 |
Automatic identification of small molecules that promote cell conversion and reprogramming F Napolitano, T Rapakoulia, P Annunziata, A Hasegawa, M Cardon, ... Stem cell reports 16 (5), 1381-1390, 2021 | 18 | 2021 |
Consensus clustering in gene expression P Galdi, F Napolitano, R Tagliaferri Computational Intelligence Methods for Bioinformatics and Biostatistics …, 2015 | 14 | 2015 |