| Epigenetic differences between naïve and primed pluripotent stem cells S Takahashi, S Kobayashi, I Hiratani Cellular and Molecular Life Sciences 75, 1191-1203, 2018 | 117 | 2018 |
| Genome-wide stability of the DNA replication program in single mammalian cells S Takahashi, H Miura, T Shibata, K Nagao, K Okumura, M Ogata, ... Nature genetics 51 (3), 529-540, 2019 | 88 | 2019 |
| Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization H Miura, S Takahashi, R Poonperm, A Tanigawa, S Takebayashi, ... Nature genetics 51 (9), 1356-1368, 2019 | 78 | 2019 |
| Induction of the G2/M transition stabilizes haploid embryonic stem cells S Takahashi, J Lee, T Kohda, A Matsuzawa, M Kawasumi, ... Development 141 (20), 3842-3847, 2014 | 58 | 2014 |
| Dual functions of the RFTS domain of Dnmt1 in replication-coupled DNA methylation and in protection of the genome from aberrant methylation RG Garvilles, T Hasegawa, H Kimura, J Sharif, M Muto, H Koseki, ... PloS one 10 (9), e0137509, 2015 | 33 | 2015 |
| Practical analysis of Hi-C data: generating A/B compartment profiles H Miura, R Poonperm, S Takahashi, I Hiratani X-Chromosome Inactivation: Methods and Protocols, 221-245, 2018 | 31 | 2018 |
| Live imaging of X chromosome reactivation dynamics in early mouse development can discriminate naïve from primed pluripotent stem cells S Kobayashi, Y Hosoi, H Shiura, K Yamagata, S Takahashi, Y Fujihara, ... Development 143 (16), 2958-2964, 2016 | 25 | 2016 |
| A novel method to analyze 5-hydroxymethylcytosine in CpG sequences using maintenance DNA methyltransferase, DNMT1 S Takahashi, I Suetake, J Engelhardt, S Tajima FEBS open bio 5, 741-747, 2015 | 25 | 2015 |
| Mapping replication timing domains genome wide in single mammalian cells with single-cell DNA replication sequencing H Miura, S Takahashi, T Shibata, K Nagao, C Obuse, K Okumura, ... Nature Protocols 15 (12), 4058-4100, 2020 | 20 | 2020 |
| DNA replication timing enters the single-cell era I Hiratani, S Takahashi Genes 10 (3), 221, 2019 | 20 | 2019 |
| Enhanced processivity of Dnmt1 by monoubiquitinated histone H3 Y Mishima, L Brueckner, S Takahashi, T Kawakami, J Otani, A Shinohara, ... Genes to cells 25 (1), 22-32, 2020 | 19 | 2020 |
| Simple and accurate single base resolution analysis of 5-hydroxymethylcytosine by catalytic oxidative bisulfite sequencing using micelle incarcerated oxidants S Fukuzawa, S Takahashi, K Tachibana, S Tajima, I Suetake Bioorganic & Medicinal Chemistry 24 (18), 4254-4262, 2016 | 17 | 2016 |
| Dynamics of transcription-mediated conversion from euchromatin to facultative heterochromatin at the Xist promoter by Tsix T Ohhata, K Yamazawa, A Miura-Kamio, S Takahashi, S Sakai, Y Tamura, ... Cell Reports 34 (13), 2021 | 15 | 2021 |
| SAF-A promotes origin licensing and replication fork progression to ensure robust DNA replication C Connolly, S Takahashi, H Miura, I Hiratani, N Gilbert, AD Donaldson, ... Journal of Cell Science 135 (2), jcs258991, 2022 | 14 | 2022 |
| RFTS‐dependent negative regulation of Dnmt1 by nucleosome structure and histone tails Y Mishima, L Brueckner, S Takahashi, T Kawakami, K Arita, S Oka, ... The FEBS Journal 284 (20), 3455-3469, 2017 | 13 | 2017 |
| The temporal order of DNA replication shaped by mammalian DNA methyltransferases S Takebayashi, T Ryba, K Wimbish, T Hayakawa, M Sakaue, K Kuriya, ... Cells 10 (2), 266, 2021 | 9 | 2021 |
| Embryonic genome instability upon DNA replication timing program emergence S Takahashi, H Kyogoku, T Hayakawa, H Miura, A Oji, Y Kondo, ... Nature, 1-9, 2024 | 1 | 2024 |
