Evolutionary constraint and innovation across hundreds of placental mammals MJ Christmas, IM Kaplow, DP Genereux, MX Dong, GM Hughes, X Li, ... Science 380 (6643), eabn3943, 2023 | 153 | 2023 |
Integrating gene annotation with orthology inference at scale BM Kirilenko, C Munegowda, E Osipova, D Jebb, V Sharma, M Blumer, ... Science 380 (6643), eabn3107, 2023 | 83 | 2023 |
A genomic timescale for placental mammal evolution NM Foley, VC Mason, AJ Harris, KR Bredemeyer, J Damas, HA Lewin, ... Science 380 (6643), eabl8189, 2023 | 79 | 2023 |
Leveraging base-pair mammalian constraint to understand genetic variation and human disease PF Sullivan, JRS Meadows, S Gazal, BDN Phan, X Li, DP Genereux, ... Science 380 (6643), eabn2937, 2023 | 73 | 2023 |
Three-dimensional genome rewiring in loci with human accelerated regions KC Keough, S Whalen, F Inoue, PF Przytycki, T Fair, C Deng, M Steyert, ... Science 380 (6643), eabm1696, 2023 | 59 | 2023 |
Insights into mammalian TE diversity through the curation of 248 genome assemblies AB Osmanski, NS Paulat, J Korstian, JR Grimshaw, M Halsey, ... Science 380 (6643), eabn1430, 2023 | 54 | 2023 |
Mammalian evolution of human cis-regulatory elements and transcription factor binding sites G Andrews, K Fan, HE Pratt, N Phalke, Zoonomia Consortium §, ... Science 380 (6643), eabn7930, 2023 | 51 | 2023 |
Relating enhancer genetic variation across mammals to complex phenotypes using machine learning IM Kaplow, AJ Lawler, DE Schäffer, C Srinivasan, HH Sestili, ME Wirthlin, ... Science 380 (6643), eabm7993, 2023 | 51 | 2023 |
The contribution of historical processes to contemporary extinction risk in placental mammals AP Wilder, MA Supple, A Subramanian, A Mudide, R Swofford, ... Science 380 (6643), eabn5856, 2023 | 47 | 2023 |
The functional and evolutionary impacts of human-specific deletions in conserved elements JR Xue, A Mackay-Smith, K Mouri, MF Garcia, MX Dong, JF Akers, ... Science 380 (6643), eabn2253, 2023 | 32 | 2023 |
Simultaneous TE analysis of 19 Heliconiine butterflies yields novel insights into rapid TE-based genome diversification and multiple SINE births and deaths DA Ray, JR Grimshaw, MK Halsey, JM Korstian, AB Osmanski, ... Genome biology and evolution 11 (8), 2162-2177, 2019 | 25 | 2019 |
A High-Quality Reference Genome Assembly of the Saltwater Crocodile, Crocodylus porosus, Reveals Patterns of Selection in Crocodylidae A Ghosh, MG Johnson, AB Osmanski, S Louha, NJ Bayona-Vásquez, ... Genome Biology and Evolution 12 (1), 3635-3646, 2020 | 18 | 2020 |
Vocal learning–associated convergent evolution in mammalian proteins and regulatory elements ME Wirthlin, TA Schmid, JE Elie, X Zhang, A Kowalczyk, R Redlich, ... Science 383 (6690), eabn3263, 2024 | 14 | 2024 |
Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs KL Moon, HJ Huson, K Morrill, MS Wang, X Li, K Srikanth, ... Science 380 (6643), eabn5887, 2023 | 10 | 2023 |
Chiropterans are a hotspot for horizontal transfer of DNA transposons in Mammalia NS Paulat, JM Storer, DD Moreno-Santillán, AB Osmanski, KAM Sullivan, ... Molecular biology and evolution 40 (5), msad092, 2023 | 9 | 2023 |
Insights into mammalian TE diversity via the curation of 248 mammalian genome assemblies AB Osmanski, NS Paulat, J Korstian, JR Grimshaw, M Halsey, ... bioRxiv, 2022.12. 28.522108, 2022 | 3 | 2022 |
Transposable Elements in Bats Show Differential Accumulation Patterns Determined by Class and Functionality NS Paulat, E McGuire, K Subramanian, AB Osmanski, ... Life 12 (8), 1190, 2022 | 1 | 2022 |
On the Use of Unmanned Aerial Vehicles to Rapidly Assess Microhabitats of Two Texas Lizard Species, Cophosaurus Texanus and Aspidoscelis Gularis AB Osmanski | 1 | 2014 |
The evolution of heteromorphic sex chromosomes in plants SB Carey, PC Bentz, JT Lovell, LM Akozbek, JS Havill, L Padgitt-Cobb, ... bioRxiv, 2024.12. 09.627636, 2024 | | 2024 |
Genomic Signatures of Selection Detection Across the Order Crocodylia AB Osmanski, M Johnson, J Gongora, LD Densmore III, DA Ray INTEGRATIVE AND COMPARATIVE BIOLOGY 60, E181-E181, 2020 | | 2020 |