| Genetic Adaptation Associated with Genome-Doubling in Autotetraploid Arabidopsis arenosa JD Hollister, BJ Arnold, E Svedin, KS Xue, BP Dilkes, K Bomblies PLoS genetics 8 (12), e1003093, 2012 | 188 | 2012 |
| Parallel evolution of influenza across multiple spatiotemporal scales KS Xue, T Stevens-Ayers, AP Campbell, JA Englund, SA Pergam, ... Elife 6, e26875, 2017 | 120 | 2017 |
| Within-host evolution of human influenza virus KS Xue, LH Moncla, T Bedford, JD Bloom Trends in microbiology 26 (9), 781-793, 2018 | 116 | 2018 |
| Selection on Meiosis Genes in Diploid and Tetraploid Arabidopsis arenosa KM Wright, B Arnold, K Xue, M Šurinová, J O’Connell, K Bomblies Molecular biology and evolution 32 (4), 944-955, 2015 | 80 | 2015 |
| Cooperation between distinct viral variants promotes growth of H3N2 influenza in cell culture KS Xue, KA Hooper, AR Ollodart, AS Dingens, JD Bloom Elife 5, e13974, 2016 | 77 | 2016 |
| Linking influenza virus evolution within and between human hosts KS Xue, JD Bloom Virus Evolution 6 (1), veaa010, 2020 | 52 | 2020 |
| Reconciling disparate estimates of viral genetic diversity during human influenza infections KS Xue, JD Bloom Nature genetics 51 (9), 1298-1301, 2019 | 40 | 2019 |
| Cooperating H3N2 influenza virus variants are not detectable in primary clinical samples KS Xue, AL Greninger, A Pérez-Osorio, JD Bloom mSphere Direct 3 (1), e00552-17, 2018 | 25 | 2018 |
| Sera from Individuals with Narrowly Focused Influenza Virus Antibodies Rapidly Select Viral Escape Mutations In Ovo AKF Davis, K McCormick, ME Gumina, JG Petrie, ET Martin, KS Xue, ... Journal of Virology 92 (19), 10.1128/jvi. 00859-18, 2018 | 21 | 2018 |
| Laboratory divergence of Methylobacterium extorquens AM1 through unintended domestication and past selection for antibiotic resistance SM Carroll, KS Xue, CJ Marx BMC microbiology 14, 1-12, 2014 | 18 | 2014 |
| Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron HA Arjes, J Sun, H Liu, TH Nguyen, RN Culver, AI Celis, SJ Walton, ... BMC biology 20 (1), 285, 2022 | 11 | 2022 |
| Optimization of the 16S rRNA sequencing analysis pipeline for studying in vitro communities of gut commensals AI Celis, A Aranda-Díaz, R Culver, K Xue, D Relman, H Shi, KC Huang Iscience 25 (4), 2022 | 8 | 2022 |
| Prolonged delays in human microbiota transmission after a controlled antibiotic perturbation KS Xue, SJ Walton, DA Goldman, ML Morrison, AJ Verster, AB Parrott, ... bioRxiv, 2023 | 6 | 2023 |
| Competition for shared resources increases dependence on initial population size during coalescence of gut microbial communities DA Goldman, KS Xue, AB Parrott, RR Jeeda, LR Franzese, JG Lopez, ... bioRxiv, 2023 | | 2023 |
| Evolutionary dynamics of influenza virus across spatiotemporal scales KS Xue | | 2019 |
| 613. Transmission of Influenza Virus in Mother and Infant Transmission Events in Nepal E Scott, J Kuypers, K Xue, L Stewart, L Shrestha, J Tielsch, MC Steinhoff, ... Open Forum Infectious Diseases 5 (suppl_1), S223-S224, 2018 | | 2018 |
| Cooperating H3N2 influenza virus variants are not detectable in primary clinical samples. mSphere 3: e00552-17 KS Xue, AL Greninger, A Pérez-Osorio, JD Bloom | | 2018 |
| Looking Deep inside Influenza Infections KS Xue, JD Bloom CELL SYSTEMS 5 (1), 4-4, 2017 | | 2017 |
| Quantifying compositional variability in microbial communities ML Morrison, KS Xue, NA Rosenberg 2024 Spring Western Sectional Meeting, 0 | | |
