| Identification of serum metabolites associating with chronic kidney disease progression and anti-fibrotic effect of 5-methoxytryptophan DQ Chen, G Cao, H Chen, CP Argyopoulos, H Yu, W Su, L Chen, ... Nature communications 10 (1), 1476, 2019 | 210 | 2019 |
| Towards precise classification of cancers based on robust gene functional expression profiles Z Guo, T Zhang, X Li, Q Wang, J Xu, H Yu, J Zhu, H Wang, C Wang, ... BMC bioinformatics 6 (1), 1, 2005 | 206 | 2005 |
| Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis Y Guo, Y Dai, H Yu, S Zhao, DC Samuels, Y Shyr Genomics 109 (2), 83-90, 2017 | 169 | 2017 |
| Systematic analysis of head-to-head gene organization: evolutionary conservation and potential biological relevance YY Li, H Yu, ZM Guo, TQ Guo, K Tu, YX Li PLoS Computational Biology 1, 2006 | 163 | 2006 |
| Transcriptome sequencing and genome-wide association analyses reveal lysosomal function and actin cytoskeleton remodeling in schizophrenia and bipolar disorder Z Zhao, J Xu, J Chen, S Kim, M Reimers, SA Bacanu, H Yu, C Liu, J Sun, ... Molecular psychiatry 20 (5), 563-572, 2015 | 160 | 2015 |
| Link-based quantitative methods to identify differentially coexpressed genes and gene pairs H Yu, BH Liu, ZQ Ye, C Li, YX Li, YY Li BMC bioinformatics 12 (1), 1, 2011 | 108 | 2011 |
| DCGL: an R package for identifying differentially coexpressed genes and links from gene expression microarray data BH Liu, H Yu, K Tu, C Li, YX Li, YY Li Bioinformatics 26 (20), 2637-2638, 2010 | 105 | 2010 |
| Broadly predicting specific gene functions with expression similarity and taxonomy similarity H Yu, L Gao, K Tu, Z Guo Gene 352, 75-81, 2005 | 99 | 2005 |
| DCGL v2. 0: an R package for unveiling differential regulation from differential co-expression J Yang, H Yu, BH Liu, Z Zhao, L Liu, LX Ma, YX Li, YY Li PLoS One 8 (11), e79729, 2013 | 98 | 2013 |
| Architectures and accuracy of artificial neural network for disease classification from omics data H Yu, DC Samuels, Y Zhao, Y Guo BMC genomics 20 (1), 167, 2019 | 83 | 2019 |
| Genetic Relationship between Schizophrenia and Nicotine Dependence J Chen, SA Bacanu, H Yu, Z Zhao, P Jia, KS Kendler, HR Kranzler, ... Scientific reports 6, 2016 | 79 | 2016 |
| Combinatorial network of primary and secondary microRNA-driven regulatory mechanisms K Tu, H Yu, YJ Hua, YY Li, L Liu, L Xie, YX Li Nucleic acids research, gkp638, 2009 | 79 | 2009 |
| Quantitative Proteomic Analysis of Small and Large Extracellular Vesicles (EVs) Reveals Enrichment of Adhesion Proteins in Small EVs L Jimenez, H Yu, AJ McKenzie, JL Franklin, JG Patton, Q Liu, AM Weaver Journal of proteome research, 2019 | 78 | 2019 |
| EW_dmGWAS: edge-weighted dense module search for genome-wide association studies and gene expression profiles Q Wang, H Yu, Z Zhao, P Jia Bioinformatics, btv150, 2015 | 66 | 2015 |
| Reproducible combinatorial regulatory networks elucidate novel oncogenic microRNAs in non-small cell lung cancer R Mitra, MD Edmonds, J Sun, M Zhao, H Yu, CM Eischen, Z Zhao Rna 20 (9), 1356-1368, 2014 | 59 | 2014 |
| Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data H Yu, F Wang, K Tu, L Xie, YY Li, YX Li BMC bioinformatics 8 (1), 194, 2007 | 53 | 2007 |
| Learnability-based further prediction of gene functions in Gene Ontology K Tu, H Yu, Z Guo, X Li Genomics 84 (6), 922-928, 2004 | 44 | 2004 |
| Systems perspectives on erythromycin biosynthesis by comparative genomic and transcriptomic analyses of S. erythraea E3 and NRRL23338 strains YY Li, X Chang, WB Yu, H Li, ZQ Ye, H Yu, BH Liu, Y Zhang, SL Zhang, ... BMC genomics 14 (1), 523, 2013 | 41 | 2013 |
| beRBP: binding estimation for human RNA-binding proteins H Yu, J Wang, Q Sheng, Q Liu, Y Shyr Nucleic acids research 47 (5), e26-e26, 2018 | 37 | 2018 |
| Combinatorial network of transcriptional regulation and microRNA regulation in human cancer H Yu, K Tu, YJ Wang, JZ Mao, L Xie, YY Li, YX Li BMC systems biology 6 (1), 1, 2012 | 32 | 2012 |
