MicroRNA-101, down-regulated in hepatocellular carcinoma, promotes apoptosis and suppresses tumorigenicity H Su, JR Yang, T Xu, J Huang, L Xu, Y Yuan, SM Zhuang Cancer research 69 (3), 1135, 2009 | 735 | 2009 |
A functional polymorphism in the miR-146a gene is associated with the risk for hepatocellular carcinoma T Xu, Y Zhu, QK Wei, Y Yuan, F Zhou, YY Ge, JR Yang, H Su, SM Zhuang Carcinogenesis 29 (11), 2126, 2008 | 406 | 2008 |
Balanced Codon Usage Optimizes Eukaryotic Translational Efficiency W Qian, JR Yang, NM Pearson, C Maclean, J Zhang PLoS Genetics 8 (3), e1002603, 2012 | 345 | 2012 |
Determinants of the rate of protein sequence evolution J Zhang, JR Yang Nature Reviews Genetics 16 (7), 409-420, 2015 | 334 | 2015 |
MicroRNA-26a/b and their host genes cooperate to inhibit the G1/S transition by activating the pRb protein Y Zhu, Y Lu, Q Zhang, JJ Liu, TJ Li, JR Yang, C Zeng, SM Zhuang Nucleic Acids Research, 2011 | 242 | 2011 |
Pseudogenization of the umami taste receptor gene Tas1r1 in the giant panda coincided with its dietary switch to bamboo H Zhao, JR Yang, H Xu, J Zhang Molecular biology and evolution 27 (12), 2669, 2010 | 188 | 2010 |
Protein misinteraction avoidance causes highly expressed proteins to evolve slowly JR Yang, BY Liao, SM Zhuang, J Zhang Proceedings of the National Academy of Sciences, 2012 | 186 | 2012 |
Codon-by-codon modulation of translational speed and accuracy via mRNA folding JR Yang, X Chen, J Zhang PLoS biology 12 (7), e1001910, 2014 | 123 | 2014 |
Differential requirements for mRNA folding partially explain why highly expressed proteins evolve slowly J Park, C., Chen, X., Yang, J.-R., and Zhang Proceedings of the National Academy of Sciences, 2013 | 117 | 2013 |
Impact of translational error-induced and error-free misfolding on the rate of protein evolution JR Yang, SM Zhuang, J Zhang Molecular systems biology 6 (1), 2010 | 99 | 2010 |
Dissimilation of synonymous codon usage bias in virus–host coevolution due to translational selection F Chen, P Wu, S Deng, H Zhang, Y Hou, Z Hu, J Zhang, X Chen, JR Yang Nature ecology & evolution 4 (4), 589-600, 2020 | 92 | 2020 |
Genomic variations of COVID-19 suggest multiple outbreak sources of transmission L Zhang, JR Yang, Z Zhang, Z Lin MedRxiv, 2020.02. 25.20027953, 2020 | 41 | 2020 |
Human long noncoding RNAs are substantially less folded than messenger RNAs JR Yang, J Zhang Molecular biology and evolution 32 (4), 970-977, 2015 | 40 | 2015 |
Deciphering the genic basis of yeast fitness variation by simultaneous forward and reverse genetics CJ Maclean, BPH Metzger, JR Yang, WC Ho, B Moyers, J Zhang Molecular biology and evolution 34 (10), 2486-2502, 2017 | 39 | 2017 |
Intra and interspecific variations of gene expression levels in yeast are largely neutral:(Nei Lecture, SMBE 2016, Gold Coast) JR Yang, CJ Maclean, C Park, H Zhao, J Zhang Molecular biology and evolution 34 (9), 2125-2139, 2017 | 38 | 2017 |
MtiBase: a database for decoding microRNA target sites located within CDS and 5′ UTR regions from CLIP-Seq and expression profile datasets ZW Guo, C Xie, JR Yang, JH Li, JH Yang, L Zheng Database 2015, bav102, 2015 | 36 | 2015 |
Risk stratification of cervical lesions using capture sequencing and machine learning method based on HPV and human integrated genomic profiles R Tian, Z Cui, D He, X Tian, Q Gao, X Ma, J Yang, J Wu, BC Das, ... Carcinogenesis 40 (10), 1220-1228, 2019 | 27 | 2019 |
Nascent RNA folding mitigates transcription-associated mutagenesis X Chen, JR Yang, J Zhang Genome Research 26 (1), 50-59, 2016 | 26 | 2016 |
Expression level is a major modifier of the fitness landscape of a protein coding gene Z Wu, X Cai, X Zhang, Y Liu, G Tian, JR Yang, X Chen Nature Ecology & Evolution 6 (1), 103-115, 2022 | 25 | 2022 |
Does mRNA structure contain genetic information for regulating co-translational protein folding? JR Yang Zoological Research 38 (1), 36, 2017 | 12 | 2017 |