Driver fusions and their implications in the development and treatment of human cancers Q Gao, WW Liang, SM Foltz, G Mutharasu, RG Jayasinghe, S Cao, ... Cell reports 23 (1), 227-238. e3, 2018 | 389 | 2018 |
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 317 | 2020 |
Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 227 | 2021 |
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 150 | 2021 |
Conservation of copy number profiles during engraftment and passaging of patient-derived cancer xenografts XY Woo, J Giordano, A Srivastava, ZM Zhao, MW Lloyd, R de Bruijn, ... Nature genetics 53 (1), 86-99, 2021 | 105 | 2021 |
Co-evolution of tumor and immune cells during progression of multiple myeloma R Liu, Q Gao, SM Foltz, JS Fowles, L Yao, JT Wang, S Cao, H Sun, ... Nature communications 12 (1), 2559, 2021 | 54 | 2021 |
ZFX acts as a transcriptional activator in multiple types of human tumors by binding downstream from transcription start sites at the majority of CpG island promoters SK Rhie, L Yao, Z Luo, H Witt, S Schreiner, Y Guo, AA Perez, PJ Farnham Genome research 28 (3), 310-320, 2018 | 48 | 2018 |
Comprehensive characterization of 536 patient-derived xenograft models prioritizes candidates for targeted treatment H Sun, S Cao, RJ Mashl, CK Mo, S Zaccaria, MC Wendl, SR Davies, ... Nature communications 12 (1), 5086, 2021 | 37 | 2021 |
Spatially restricted drivers and transitional cell populations cooperate with the microenvironment in untreated and chemo-resistant pancreatic cancer D Cui Zhou, RG Jayasinghe, S Chen, JM Herndon, MD Iglesia, P Navale, ... Nature genetics 54 (9), 1390-1405, 2022 | 26 | 2022 |
Evolution and structure of clinically relevant gene fusions in multiple myeloma SM Foltz, Q Gao, CJ Yoon, H Sun, L Yao, Y Li, RG Jayasinghe, S Cao, ... Nature communications 11 (1), 2666, 2020 | 25 | 2020 |
Isotope tracing in adult zebrafish reveals alanine cycling between melanoma and liver FJ Naser, MM Jackstadt, R Fowle-Grider, JL Spalding, K Cho, E Stancliffe, ... Cell metabolism 33 (7), 1493-1504. e5, 2021 | 18 | 2021 |
Clinical Proteomic Tumor Analysis Consortium. Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225, 2020 | 16 | 2020 |
Clinical Proteomic Tumor Analysis Consortium Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer Cell 39, 509-528, 2021 | 13 | 2021 |
Spatial drivers and pre-cancer populations collaborate with the microenvironment in untreated and chemo-resistant pancreatic cancer DC Zhou, RG Jayasinghe, JM Herndon, E Storrs, CK Mo, Y Wu, RS Fulton, ... BioRxiv, 2021.01. 13.426413, 2021 | 10 | 2021 |
Fusion Analysis Working G Q Gao, WW Liang, SM Foltz, G Mutharasu, RG Jayasinghe, S Cao, ... Cancer Genome Atlas Research N, Chen K, Lazar AJ, Fields RC, Wendl MC, Van …, 2018 | 7 | 2018 |
Cross center single-cell RNA sequencing study of the immune microenvironment in rapid progressing multiple myeloma W Pilcher, BE Thomas, SS Bhasin, RG Jayasinghe, L Yao, ... npj Genomic Medicine 8 (1), 3, 2023 | 3 | 2023 |
Comprehensive characterization of the multiple myeloma immune microenvironment using integrated scRNA-seq, CyTOF, and CITE-seq analysis L Yao, RG Jayasinghe, BH Lee, SS Bhasin, W Pilcher, DB Doxie, ... Cancer Research Communications 2 (10), 1255-1265, 2022 | 2 | 2022 |
Integrated Cytof, Scrna-Seq and Cite-Seq Analysis of Bone Marrow Immune Microenvironment in the Mmrf Commpass Study L Yao, RG Jayasinghe, BE Thomas, SS Bhasin, N Fernandez, T Kourelis, ... Blood 136, 28-29, 2020 | 2 | 2020 |
Myeloma Cell Associated Therapeutic Protein Discovery Using Single Cell RNA-Seq Data L Yao, RG Jayasinghe, T Wang, J O'Neal, R Liu, MP Rettig, CF Tsai, ... Blood 136, 4-5, 2020 | 1 | 2020 |
Single-cell transcriptomic and proteomic diversity in multiple myeloma RG Jayasinghe, Y Wu, Y Zhu, R Liu, MA Fiala, DR Kohnen, CF Tsai, ... Blood 134, 5531, 2019 | 1 | 2019 |