| N6-methyladenine DNA modification in the human genome CL Xiao, S Zhu, M He, D Chen, Q Zhang, Y Chen, G Yu, J Liu, SQ Xie, ... Molecular cell 71 (2), 306-318. e7, 2018 | 471 | 2018 |
| A high-quality apple genome assembly reveals the association of a retrotransposon and red fruit colour L Zhang, J Hu, X Han, J Li, Y Gao, CM Richards, C Zhang, Y Tian, G Liu, ... Nature communications 10 (1), 1494, 2019 | 415 | 2019 |
| Detection of DNA base modifications by deep recurrent neural network on Oxford Nanopore sequencing data Q Liu, L Fang, G Yu, D Wang, CL Xiao, K Wang Nature communications 10 (1), 2449, 2019 | 308 | 2019 |
| Long-read sequencing and de novo assembly of a Chinese genome L Shi, Y Guo, C Dong, J Huddleston, H Yang, X Han, A Fu, Q Li, N Li, ... Nature communications 7 (1), 12065, 2016 | 291 | 2016 |
| Efficient assembly of nanopore reads via highly accurate and intact error correction Y Chen, F Nie, SQ Xie, YF Zheng, Q Dai, T Bray, YX Wang, JF Xing, ... Nature Communications 12 (1), 60, 2021 | 285 | 2021 |
| DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning P Ni, N Huang, Z Zhang, DP Wang, F Liang, Y Miao, CL Xiao, F Luo, ... Bioinformatics 35 (22), 4586-4595, 2019 | 225 | 2019 |
| Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore D Lang, S Zhang, P Ren, F Liang, Z Sun, G Meng, Y Tan, X Li, Q Lai, ... Gigascience 9 (12), giaa123, 2020 | 137 | 2020 |
| NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads J Hu, Z Wang, Z Sun, B Hu, AO Ayoola, F Liang, J Li, JR Sandoval, ... Genome Biology 25 (1), 107, 2024 | 111 | 2024 |
| Interrogating the “unsequenceable” genomic trinucleotide repeat disorders by long-read sequencing Q Liu, P Zhang, D Wang, W Gu, K Wang Genome medicine 9, 1-16, 2017 | 104 | 2017 |
| Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing X Fan, D Tang, Y Liao, P Li, Y Zhang, M Wang, F Liang, X Wang, Y Gao, ... PLoS Biology 18 (12), e3001017, 2020 | 70 | 2020 |
| Single-molecule optical mapping enables quantitative measurement of D4Z4 repeats in facioscapulohumeral muscular dystrophy (FSHD) Y Dai, P Li, Z Wang, F Liang, F Yang, L Fang, Y Huang, S Huang, J Zhou, ... Journal of Medical Genetics 57 (2), 109-120, 2020 | 66 | 2020 |
| Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis H Miao, J Zhou, Q Yang, F Liang, D Wang, N Ma, B Gao, J Du, G Lin, ... Hereditas 155, 1-9, 2018 | 63 | 2018 |
| Tung Tree (Vernicia Fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production L Zhang, M Liu, H Long, W Dong, A Pasha, E Esteban, W Li, X Yang, Z Li, ... Genomics, Proteomics and Bioinformatics 17 (6), 558-575, 2019 | 60 | 2019 |
| Charting the complexity of the activated sludge microbiome through a hybrid sequencing strategy L Liu, Y Wang, Y Yang, D Wang, SH Cheng, C Zheng, T Zhang Microbiome 9, 1-15, 2021 | 47 | 2021 |
| Location of balanced chromosome-translocation breakpoints by long-read sequencing on the Oxford Nanopore platform L Hu, F Liang, D Cheng, Z Zhang, G Yu, J Zha, Y Wang, Q Xia, D Yuan, ... Frontiers in genetics 10, 1313, 2020 | 44 | 2020 |
| Efficient assembly of nanopore reads via highly accurate and intact error correction. Nat Commun 12: 60 Y Chen, F Nie, SQ Xie, YF Zheng, Q Dai, T Bray, YX Wang, JF Xing, ... | 38 | 2021 |
| NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data L Fang, J Hu, D Wang, K Wang BMC bioinformatics 19, 1-11, 2018 | 38 | 2018 |
| Long-read sequence assembly of the firefly Pyrocoelia pectoralis genome X Fu, J Li, Y Tian, W Quan, S Zhang, Q Liu, F Liang, X Zhu, L Zhang, ... GigaScience 6 (12), gix112, 2017 | 34 | 2017 |
| Fast and accurate assembly of Nanopore reads via progressive error correction and adaptive read selection Y Chen, F Nie, SQ Xie, YF Zheng, T Bray, Q Dai, YX Wang, J Xing, ... BioRxiv, 2020.02. 01.930107, 2020 | 31 | 2020 |
| Nanopore sequencing of African swine fever virus L Jia, M Jiang, K Wu, J Hu, Y Wang, W Quan, M Hao, H Liu, H Wei, W Fan, ... Science China Life Sciences 63, 160-164, 2020 | 31 | 2020 |
