A modified next reaction method for simulating chemical systems with time dependent propensities and delays DF Anderson Journal of Chemical Physics 127 (21), 214107-214107, 2007 | 420 | 2007 |
Continuous time Markov chain models for chemical reaction networks DF Anderson, TG Kurtz Design and analysis of biomolecular circuits: engineering approaches to …, 2011 | 368 | 2011 |
Product-form stationary distributions for deficiency zero chemical reaction networks DF Anderson, G Craciun, TG Kurtz Bulletin of mathematical biology 72, 1947-1970, 2010 | 298 | 2010 |
Stochastic analysis of biochemical systems DF Anderson, TG Kurtz Mathematical Biosciences, 2015 | 290 | 2015 |
A proof of the Global Attractor Conjecture in the single linkage class case DF Anderson SIAM Journal of Applied Mathematics 71 (4), 1487-1508, 2011 | 180 | 2011 |
Multi-level Monte Carlo for continuous time Markov chains, with applications to biochemical kinetics DF Anderson, DJ Higham SIAM Multiscale Modeling and Simulation 10 (1), 146-179, 2012 | 159 | 2012 |
Incorporating postleap checks in tau-leaping DF Anderson The Journal of chemical physics 128 (5), 2008 | 159 | 2008 |
Error analysis of tau-leap simulation methods DF Anderson, A Ganguly, TG Kurtz The Annals of Applied Probability 21 (6), 2226-2262, 2011 | 124 | 2011 |
An efficient finite difference method for parameter sensitivities of continuous time Markov chains DF Anderson SIAM Journal on Numerical Analysis 50 (5), 2237-2258, 2012 | 120 | 2012 |
Long-range allosteric interactions between the folate and methionine cycles stabilize DNA methylation reaction rate HF Nijhout, MC Reed, DF Anderson, JC Mattingly, SJ James, CM Ulrich Epigenetics 1 (2), 81-87, 2006 | 99 | 2006 |
Global asymptotic stability for a class of nonlinear chemical equations DF Anderson SIAM Journal on Applied Mathematics 70 (6), 1840-1858, 2010 | 91 | 2010 |
Stochastic analysis of biochemical reaction networks with absolute concentration robustness DF Anderson, G Enciso, MD Johnston Journal of the Royal Society Interface 11 (93), 20130943, 2014 | 75 | 2014 |
The dynamics of weakly reversible population processes near facets DF Anderson, A Shiu SIAM Journal on Applied Mathematics 70 (6), 1840-1858, 2010 | 65 | 2010 |
Stochastic representations of ion channel kinetics and exact stochastic simulation of neuronal dynamics DF Anderson, B Ermentrout, PJ Thomas Journal of computational neuroscience 38, 67-82, 2015 | 61 | 2015 |
Lyapunov functions, stationary distributions, and non-equilibrium potential for reaction networks DF Anderson, G Craciun, M Gopalkrishnan, C Wiuf Bulletin of mathematical biology 77, 1744-1767, 2015 | 59 | 2015 |
A weak trapezoidal method for a class of stochastic differential equations DF Anderson, JC Mattingly Communications in Mathematical Sciences 9 (1), 301-318, 2011 | 58 | 2011 |
A functional central limit theorem for a Markov-modulated infinite-server queue DF Anderson, J Blom, M Mandjes, H Thorsdottir, KD Turck available at arXiv.org: http://arxiv.org/abs/1309.3962, 2013 | 45 | 2013 |
Complexity of multilevel Monte Carlo tau-leaping DF Anderson, DJ Higham, Y Sun SIAM Journal on Numerical Analysis 52 (6), 3106-3127, 2014 | 42 | 2014 |
Product-form stationary distributions for deficiency zero networks with non-mass action kinetics DF Anderson, SL Cotter Bulletin of mathematical biology 78, 2390-2407, 2016 | 39 | 2016 |
Non-explosivity of stochastically modeled reaction networks that are complex balanced DF Anderson, D Cappelletti, M Koyama, TG Kurtz Bulletin of mathematical biology 80, 2561-2579, 2018 | 36 | 2018 |