The sequence alignment/map format and SAMtools H Li, B Handsaker, A Wysoker, T Fennell, J Ruan, N Homer, G Marth, ... bioinformatics 25 (16), 2078-2079, 2009 | 55248 | 2009 |
Fast and accurate short read alignment with Burrows–Wheeler transform H Li, R Durbin Bioinformatics 25 (14), 1754-1760, 2009 | 45202 | 2009 |
A global reference for human genetic variation GP Consortium Nature 526 (7571), 68-74, 2015 | 13316* | 2015 |
Fast and accurate long-read alignment with Burrows–Wheeler transform H Li, R Durbin Bioinformatics 26 (5), 589-595, 2010 | 11830 | 2010 |
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM H Li arXiv preprint arXiv:1303.3997, 2013 | 10324 | 2013 |
A map of human genome variation from population-scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061-1073, 2010 | 8801 | 2010 |
Minimap2: pairwise alignment for nucleotide sequences H Li Bioinformatics 34 (18), 3094-3100, 2018 | 8511 | 2018 |
An integrated map of genetic variation from 1,092 human genomes 1000 Genomes Project Consortium Nature 491 (7422), 56-65, 2012 | 8283 | 2012 |
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data H Li Bioinformatics 27 (21), 2987-2993, 2011 | 5944 | 2011 |
Twelve years of SAMtools and BCFtools P Danecek, JK Bonfield, J Liddle, J Marshall, V Ohan, MO Pollard, ... GigaScience 10 (2), giab008, 2021 | 5598* | 2021 |
Accurate whole human genome sequencing using reversible terminator chemistry DR Bentley, S Balasubramanian, HP Swerdlow, GP Smith, J Milton, ... nature 456 (7218), 53-59, 2008 | 5057 | 2008 |
A draft sequence of the Neandertal genome RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ... science 328 (5979), 710-722, 2010 | 4965 | 2010 |
Mapping short DNA sequencing reads and calling variants using mapping quality scores H Li, J Ruan, R Durbin Genome research 18 (11), 1851-1858, 2008 | 3506 | 2008 |
Inference of human population history from individual whole-genome sequences H Li, R Durbin Nature 475 (7357), 493-496, 2011 | 2396 | 2011 |
The complete genome sequence of a Neanderthal from the Altai Mountains K Prüfer, F Racimo, N Patterson, F Jay, S Sankararaman, S Sawyer, ... Nature 505 (7481), 43-49, 2014 | 2379 | 2014 |
Genetic history of an archaic hominin group from Denisova Cave in Siberia D Reich, RE Green, M Kircher, J Krause, N Patterson, EY Durand, B Viola, ... Nature 468 (7327), 1053-1060, 2010 | 2260 | 2010 |
Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm H Cheng, GT Concepcion, X Feng, H Zhang, H Li Nature methods 18 (2), 170-175, 2021 | 2208 | 2021 |
A high-coverage genome sequence from an archaic Denisovan individual M Meyer, M Kircher, MT Gansauge, H Li, F Racimo, S Mallick, ... Science 338 (6104), 222-226, 2012 | 2144 | 2012 |
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022 | 1920 | 2022 |
Ancient human genomes suggest three ancestral populations for present-day Europeans I Lazaridis, N Patterson, A Mittnik, G Renaud, S Mallick, K Kirsanow, ... Nature 513 (7518), 409-413, 2014 | 1525 | 2014 |