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Joseph Replogle
Joseph Replogle
MD-PhD student, Weissman lab @ UCSF / Whitehead Institute / MIT
在 wi.mit.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci
PL De Jager, G Srivastava, K Lunnon, J Burgess, LC Schalkwyk, L Yu, ...
Nature neuroscience 17 (9), 1156-1163, 2014
8132014
Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility
International Multiple Sclerosis Genetics Consortium*†, ANZgene, ...
Science 365 (6460), eaav7188, 2019
723*2019
Genetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus
J Bentham, DL Morris, DS Cunninghame Graham, CL Pinder, ...
Nature genetics 47 (12), 1457-1464, 2015
7012015
Polarization of the effects of autoimmune and neurodegenerative risk alleles in leukocytes
T Raj, K Rothamel, S Mostafavi, C Ye, MN Lee, JM Replogle, T Feng, ...
Science 344 (6183), 519-523, 2014
5042014
Nucleosomes impede Cas9 access to DNA in vivo and in vitro
MA Horlbeck, LB Witkowsky, B Guglielmi, JM Replogle, LA Gilbert, ...
elife 5, e12677, 2016
3882016
Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing
JK Nuñez, J Chen, GC Pommier, JZ Cogan, JM Replogle, C Adriaens, ...
Cell 184 (9), 2503-2519. e17, 2021
2482021
Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing
JM Replogle, TM Norman, A Xu, JA Hussmann, J Chen, JZ Cogan, ...
Nature biotechnology 38 (8), 954-961, 2020
1932020
CD33 modulates TREM2: convergence of Alzheimer loci
G Chan, CC White, PA Winn, M Cimpean, JM Replogle, LR Glick, ...
Nature neuroscience 18 (11), 1556-1558, 2015
1512015
Exploring genetic interaction manifolds constructed from rich single-cell phenotypes
TM Norman, MA Horlbeck, JM Replogle, AY Ge, A Xu, M Jost, LA Gilbert, ...
Science 365 (6455), 786-793, 2019
1442019
CD33: increased inclusion of exon 2 implicates the Ig V-set domain in Alzheimer's disease susceptibility
T Raj, KJ Ryan, JM Replogle, LB Chibnik, L Rosenkrantz, A Tang, ...
Human molecular genetics 23 (10), 2729-2736, 2014
1382014
Common risk alleles for inflammatory diseases are targets of recent positive selection
T Raj, M Kuchroo, JM Replogle, S Raychaudhuri, BE Stranger, ...
The American Journal of Human Genetics 92 (4), 517-529, 2013
1252013
Mapping transcriptomic vector fields of single cells
X Qiu, Y Zhang, JD Martin-Rufino, C Weng, S Hosseinzadeh, D Yang, ...
Cell 185 (4), 690-711. e45, 2022
1152022
Interindividual variation in human T regulatory cells
A Ferraro, AM D’Alise, T Raj, N Asinovski, R Phillips, A Ergun, ...
Proceedings of the National Academy of Sciences 111 (12), E1111-E1120, 2014
1142014
Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq
JM Replogle, RA Saunders, AN Pogson, JA Hussmann, A Lenail, A Guna, ...
Cell 185 (14), 2559-2575. e28, 2022
1082022
Efficient C• G-to-G• C base editors developed using CRISPRi screens, target-library analysis, and machine learning
LW Koblan, M Arbab, MW Shen, JA Hussmann, AV Anzalone, JL Doman, ...
Nature biotechnology 39 (11), 1414-1425, 2021
1052021
A human microglia-like cellular model for assessing the effects of neurodegenerative disease gene variants
KJ Ryan, CC White, K Patel, J Xu, M Olah, JM Replogle, M Frangieh, ...
Science translational medicine 9 (421), eaai7635, 2017
1032017
GIGYF2 and 4EHP inhibit translation initiation of defective messenger RNAs to assist ribosome-associated quality control
KL Hickey, K Dickson, JZ Cogan, JM Replogle, M Schoof, KN D’Orazio, ...
Molecular cell 79 (6), 950-962. e6, 2020
842020
A TREM1 variant alters the accumulation of Alzheimer‐related amyloid pathology
JM Replogle, G Chan, CC White, T Raj, PA Winn, DA Evans, RA Sperling, ...
Annals of neurology 77 (3), 469-477, 2015
822015
Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution
D Yang, MG Jones, S Naranjo, WM Rideout, KHJ Min, R Ho, W Wu, ...
Cell 185 (11), 1905-1923. e25, 2022
582022
A pharmacogenetic study implicates SLC9a9 in multiple sclerosis disease activity
F Esposito, M Sorosina, L Ottoboni, ET Lim, JM Replogle, T Raj, ...
Annals of neurology 78 (1), 115-127, 2015
492015
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