| Effect of water on a hydrophobic deep eutectic solvent H Kivela, M Salomaki, P Vainikka, E Makila, F Poletti, S Ruggeri, F Terzi, ... The Journal of Physical Chemistry B 126 (2), 513-527, 2022 | 86 | 2022 |
| Unidirectional rotating molecular motors dynamically interact with adsorbed proteins to direct the fate of mesenchymal stem cells Q Zhou, J Chen, Y Luan, PA Vainikka, S Thallmair, SJ Marrink, BL Feringa, ... Science advances 6 (5), eaay2756, 2020 | 77 | 2020 |
| Lipid fingerprints and cofactor dynamics of light-harvesting complex II in different membranes S Thallmair, PA Vainikka, SJ Marrink Biophysical journal 116 (8), 1446-1455, 2019 | 49 | 2019 |
| Martini 3 coarse-grained force field for carbohydrates F Grünewald, MH Punt, EE Jefferys, PA Vainikka, M König, V Virtanen, ... Journal of Chemical Theory and Computation 18 (12), 7555-7569, 2022 | 45 | 2022 |
| Facilitating CG simulations with MAD: The MArtini database server C Hilpert, L Beranger, PCT Souza, PA Vainikka, V Nieto, SJ Marrink, ... Journal of chemical information and modeling 63 (3), 702-710, 2023 | 33 | 2023 |
| Martini 3 coarse-grained model for type III deep eutectic solvents: Thermodynamic, structural, and extraction properties P Vainikka, S Thallmair, PCT Souza, SJ Marrink ACS Sustainable Chemistry & Engineering 9 (51), 17338-17350, 2021 | 29 | 2021 |
| Perspective: a stirring role for metabolism in cells J Losa, S Leupold, D Alonso‐Martinez, P Vainikka, S Thallmair, KM Tych, ... Molecular Systems Biology 18 (4), e10822, 2022 | 18 | 2022 |
| Salting-out effects by pressure-corrected 3D-RISM M Misin, PA Vainikka, MV Fedorov, DS Palmer The Journal of Chemical Physics 145 (19), 2016 | 18 | 2016 |
| Martini 3 Coarse-Grained Model for Second-Generation Unidirectional Molecular Motors and Switches P Vainikka, SJ Marrink Journal of Chemical Theory and Computation 19 (2), 596-604, 2023 | 3 | 2023 |
| Coarse-grained molecular dynamics of molecular machines and deep eutectic solvents P Vainikka | | 2023 |
| ELECTRONIC STRUCTURE OF METAL ENCAPSULATING DELTAHEDRAL GERMANIUM CLUSTERS P Vainikka | | 2018 |
| Molecular Dynamcis of Light-Harvesting Complex II Embedded in the Thylakoid Membrane S Thallmair, PA Vainikka, SJ Marrink Biophysical Journal 114 (3), 522a, 2018 | | 2018 |
| The structure and behaviour of DNA-nanoparticle assemblies in coarse-grained molecular dynamics simulations P Vainikka | | |
