The effects of histone H4 tail acetylations on cation-induced chromatin folding and self-association A Allahverdi, R Yang, N Korolev, Y Fan, CA Davey, CF Liu, ... Nucleic acids research 39 (5), 1680-1691, 2011 | 254 | 2011 |
A direct method for site‐specific protein acetylation F Li, A Allahverdi, R Yang, GBJ Lua, X Zhang, Y Cao, N Korolev, ... Angewandte Chemie International Edition 41 (50), 9611-9614, 2011 | 150 | 2011 |
On the competition between water, sodium ions, and spermine in binding to DNA: a molecular dynamics computer simulation study N Korolev, AP Lyubartsev, A Laaksonen, L Nordenskiöld Biophysical journal 82 (6), 2860-2875, 2002 | 137 | 2002 |
Competitive binding of Mg2+, Ca2+, Na+, and K+ ions to DNA in oriented DNA fibers: experimental and Monte Carlo simulation results N Korolev, AP Lyubartsev, A Rupprecht, L Nordenskiöld Biophysical journal 77 (5), 2736-2749, 1999 | 127 | 1999 |
Similarities and differences in interaction of K + and Na + with condensed ordered DNA. A molecular dynamics computer simulation study Y Cheng, N Korolev, L Nordenskiöld Nucleic acids research 34 (2), 686-696, 2006 | 110 | 2006 |
Polyamine–nucleic acid interactions and the effects on structure in oriented DNA fibers L van Dam, N Korolev, L Nordenskiöld Nucleic acids research 30 (2), 419-428, 2002 | 108 | 2002 |
Physicochemical analysis of electrostatic foundation for DNA–protein interactions in chromatin transformations N Korolev, OV Vorontsova, L Nordenskiöld Progress in biophysics and molecular biology 95 (1-3), 23-49, 2007 | 96 | 2007 |
A molecular dynamics simulation study of oriented DNA with polyamine and sodium counterions: diffusion and averaged binding of water and cations N Korolev, AP Lyubartsev, A Laaksonen, L NordenskioÈld Nucleic acids research 31 (20), 5971-5981, 2003 | 95 | 2003 |
Chromatin compaction under mixed salt conditions: opposite effects of sodium and potassium ions on nucleosome array folding A Allahverdi, Q Chen, N Korolev, L Nordenskiöld Scientific reports 5 (1), 8512, 2015 | 91 | 2015 |
The polyelectrolyte properties of chromatin N Korolev, A Allahverdi, AP Lyubartsev, L Nordenskiöld Soft Matter 8 (36), 9322-9333, 2012 | 88 | 2012 |
Influence of histone tails and H4 tail acetylations on nucleosome–nucleosome interactions Y Liu, C Lu, Y Yang, Y Fan, R Yang, CF Liu, N Korolev, L Nordenskiöld Journal of molecular biology 414 (5), 749-764, 2011 | 86 | 2011 |
A universal description for the experimental behavior of salt-(in) dependent oligocation-induced DNA condensation N Korolev, NV Berezhnoy, KD Eom, JP Tam, L Nordenskiöld Nucleic acids research 37 (21), 7137-7150, 2009 | 86 | 2009 |
Spermine: an “invisible” component in the crystals of B-DNA. A grand canonical Monte Carlo and molecular dynamics simulation study N Korolev, AP Lyubartsev, L Nordenskiöld, A Laaksonen Journal of Molecular Biology 308 (5), 907-917, 2001 | 84 | 2001 |
Computer modeling demonstrates that electrostatic attraction of nucleosomal DNA is mediated by histone tails N Korolev, AP Lyubartsev, L Nordenskiöld Biophysical journal 90 (12), 4305-4316, 2006 | 81 | 2006 |
Electrostatic origin of salt-induced nucleosome array compaction N Korolev, A Allahverdi, Y Yang, Y Fan, AP Lyubartsev, L Nordenskiöld Biophysical journal 99 (6), 1896-1905, 2010 | 80 | 2010 |
Electrical conduction in native deoxyribonucleic acid: Hole hopping transfer mechanism? Z Kutnjak, C Filipič, R Podgornik, L Nordenskiöld, N Korolev Physical review letters 90 (9), 098101, 2003 | 79 | 2003 |
Application of polyelectrolyte theories for analysis of DNA melting in the presence of Na+ and Mg2+ ions N Korolev, AP Lyubartsev, L Nordenskiöld Biophysical journal 75 (6), 3041-3056, 1998 | 75 | 1998 |
Regulation of nucleosome stacking and chromatin compaction by the histone H4 N-terminal tail–H2A acidic patch interaction Q Chen, R Yang, N Korolev, CF Liu, L Nordenskiöld Journal of molecular biology 429 (13), 2075-2092, 2017 | 72 | 2017 |
A coarse-grained DNA model parameterized from atomistic simulations by inverse Monte Carlo N Korolev, D Luo, AP Lyubartsev, L Nordenskiöld Polymers 6 (6), 1655-1675, 2014 | 72 | 2014 |
An advanced coarse-grained nucleosome core particle model for computer simulations of nucleosome-nucleosome interactions under varying ionic conditions Y Fan, N Korolev, AP Lyubartsev, L Nordenskiöld PLoS One 8 (2), e54228, 2013 | 59 | 2013 |